PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY28333.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 533aa    MW: 58070.5 Da    PI: 4.45
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY28333.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS451.84.4e-1381665271374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 lv++L++cAeav++++++la+al++++  la ++  +m+++a+yf+eALa+r+++    +y    p+e  +++ s+ l++   f+e+ P+lkf+h+taN
  TEY28333.1 166 LVHTLMACAEAVQQENMKLADALVKHVGLLAVSQIGAMRKVATYFAEALARRIYK----IY----PEEPLDSSLSDILQM--HFYETGPYLKFAHFTAN 254
                 689***************************************************9....44....455544556666555..5**************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea++g++rvH+iDf++ qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae++gv+fef+ +v+++l+dl+ e+L+++ 
  TEY28333.1 255 QAILEAFAGANRVHVIDFSLRQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNSDALQQVGWKLAQLAETIGVEFEFRGFVTNSLADLDAEMLEIRA 353
                 *************************************************************************************************99 PP

        GRAS 199 ...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgrei 294
                    +E++aVn+v++lh+ll++++++e+    vL+ +k ++Pk+v+vveqea+hn++ Fl+rf e+l+yys++fdsle+       ++ ++ +++lgr+i
  TEY28333.1 354 gdeEETVAVNSVFELHQLLARPGAVEK----VLDSIKAMRPKIVTVVEQEANHNGGAFLDRFNESLHYYSTMFDSLESD--GGGGQDLMMTEVYLGRQI 446
                 9889***********************....*********************************************999..5779999999******** PP

        GRAS 295 vnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +nvvac gaer+erhetle+Wr+r+++aGF pv+l+++a kqa++ll+ ++ ++gy+vee++g+l+lgW++rpL+++SaWr
  TEY28333.1 447 CNVVACDGAERVERHETLEQWRARMGSAGFDPVQLGSNAFKQASMLLALFSsGEGYMVEERDGCLMLGWHTRPLIATSAWR 527
                 ********************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MKRDRDRGKA AAAAASGKPN MWPEPQPDAG MDELFAVLGY KVKSSDMADV AEKLEQLEMA  60
MGTTADDGVS VLADDTVHYN PSDLSGWVDN MLTELTGESS TPNFAGEDDL RAIAGGAIFD  120
TTESDNGCKR MKAAEADVRS EFGENSSAVQ QPRAVVVDSQ ETGVRLVHTL MACAEAVQQE  180
NMKLADALVK HVGLLAVSQI GAMRKVATYF AEALARRIYK IYPEEPLDSS LSDILQMHFY  240
ETGPYLKFAH FTANQAILEA FAGANRVHVI DFSLRQGMQW PALMQALALR PGGPPAFRLT  300
GIGPPQPDNS DALQQVGWKL AQLAETIGVE FEFRGFVTNS LADLDAEMLE IRAGDEEETV  360
AVNSVFELHQ LLARPGAVEK VLDSIKAMRP KIVTVVEQEA NHNGGAFLDR FNESLHYYST  420
MFDSLESDGG GGQDLMMTEV YLGRQICNVV ACDGAERVER HETLEQWRAR MGSAGFDPVQ  480
LGSNAFKQAS MLLALFSSGE GYMVEERDGC LMLGWHTRPL IATSAWRIAA AEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein