PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY27658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 139aa MW: 16194.7 Da PI: 10.4893 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 41 | 2.4e-13 | 2 | 29 | 13 | 40 |
HHHHHHHHHHHHHHHHHHHT-EEEEEEE CS SRF-TF 13 fskRrngilKKAeELSvLCdaevaviif 40 f kRr g+lKKA+ELS+LC+++v ++i TEY27658.1 2 FRKRRDGLLKKANELSILCGVDVGIVIH 29 88***********************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MFRKRRDGLL KKANELSILC GVDVGIVIHK KEQSNAVLWP SPESFRSRVQ KFMEFRDEER 60 KRRMSTHEGL VKQMVQGEME NLEKLKNAIQ LKESQQLVVK SMQTNSFNGF GIDQLNAMNS 120 FADHMLKKLQ QRDNDLNAK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 60 | 86 | RKRRMSTHEGLVKQMVQGEMENLEKLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G65330.1 | 8e-16 | M-type_MADS family protein |