PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY27450.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C2H2 | ||||||||
Protein Properties | Length: 544aa MW: 58942.4 Da PI: 9.3555 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.3 | 1.3e-05 | 79 | 101 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H TEY27450.1 79 FVCEVCNKGFQREQNLQLHRRGH 101 89*******************88 PP | |||||||
2 | zf-C2H2 | 11 | 0.0014 | 155 | 177 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC++C+k + +s+ k H +t+ TEY27450.1 155 YKCEKCSKKYAVHSDWKAHSKTC 177 9******************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 544 aa Download sequence |
MAASSSSPFL SLRDENEQPQ QQQLLPSAAA APPSAAPANK RRRNQPGNPS KFITIIKPTD 60 PDAEVIALSP KTLMATNRFV CEVCNKGFQR EQNLQLHRRG HNLPWKLRQK STKEVRRKVY 120 LCPEPSCVHH DPSRALGDLT GIKKHYSRKH GEKKYKCEKC SKKYAVHSDW KAHSKTCGTR 180 EYRCDCGTLF SRRDSFITHR AFCDALAQES ARNLNPPSLS SIGSHLLGLS QHDQMNQGAL 240 SSHDILRLGR PGQQYETLVS PGGFHPSPRG LFLHPNHDHD HQDHQNQSPH SAMLPNKSSL 300 QSLMQLPQLH MNNTANTSSN SSAAGLFNLS FFPGNNNNAA STIDGGSHHS AAGYDSTLFS 360 SGNLMSIAIP SLYSTSQAMQ TPSGGQMSAT ALLQKAAQMG STATNNGGAS SSLLKSFGKS 420 PDHHSFGGSG VYGGSNSGSG NHLHDLMMNS IAAAEGGSAA SMFEQAEMEE YRGFHGGNSN 480 SQQSGFSSLE QAGRLTRDFL GVGEIVRSVR EQQQQQSGME HLGSLDLQGK TTSHTQPFGG 540 RSFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02080.1 | 5e-98 | C2H2 family protein |