PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27306.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 539aa MW: 57496.8 Da PI: 8.4129

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27306.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.3	1.5e-24	183	226	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e TEY27306.1 183 DPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVE 226 79***************************************998 PP
2	QLQ	57.3	4.9e-20	117	153	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q++ L++Q+l+yK+++an+PvP++Ll+++++ TEY27306.1 117 GPFTPSQWMDLEHQALIYKHIVANVPVPSNLLVPLKR 153 59********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MDFGVLSHKQ NAGSLPSDEN AHGSMNQRPQ DCWKSHKLLK PSQPDFSPKM ASDAFGRSNL 60 WPPPPDDGQK MLSFSSPAPP PDAGASARSI AFSICQDQAN AGNGGSGLRG SFSRLKGPFT 120 PSQWMDLEHQ ALIYKHIVAN VPVPSNLLVP LKRSLYSYGS PASYASNFLG WGGFHLGFSG 180 SNDPEPGRCR RTDGKKWRCS RDAVPDQKYC ERHINRGRHR SRKPVEGHTG HAVSGSAASK 240 VASVASSSSA SAMSTSNVSN SLSAMHHQLN SLQPNAASAD HLVSRAQDAR GLSLLPPTIG 300 AKSKDAPYTI QKQHFPFEES PHMEFGSVSS DCLLNPSEKI SYMNGSNSDS FNTKEANNSQ 360 HPVHHFIDDW PKYHQSDRTS GSWPEELKSD WTQLSMAIPI APDFSSSTGS PTNEKSTLST 420 LRLSHEVDPI RMSLGMSHDL GQPVEKESPW SPIVWGNSMG GPLGEVLTSS TSGGAGASFS 480 SVKHSPQLGS SPTGVLKKST LVSLSNSSSG GSPTNAGNKA LCNELPGSAL ITCATIQSL

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MDFGVLSHKQ NAGSLPSDEN AHGSMNQRPQ DCWKSHKLLK PSQPDFSPKM ASDAFGRSNL  60
WPPPPDDGQK MLSFSSPAPP PDAGASARSI AFSICQDQAN AGNGGSGLRG SFSRLKGPFT  120
PSQWMDLEHQ ALIYKHIVAN VPVPSNLLVP LKRSLYSYGS PASYASNFLG WGGFHLGFSG  180
SNDPEPGRCR RTDGKKWRCS RDAVPDQKYC ERHINRGRHR SRKPVEGHTG HAVSGSAASK  240
VASVASSSSA SAMSTSNVSN SLSAMHHQLN SLQPNAASAD HLVSRAQDAR GLSLLPPTIG  300
AKSKDAPYTI QKQHFPFEES PHMEFGSVSS DCLLNPSEKI SYMNGSNSDS FNTKEANNSQ  360
HPVHHFIDDW PKYHQSDRTS GSWPEELKSD WTQLSMAIPI APDFSSSTGS PTNEKSTLST  420
LRLSHEVDPI RMSLGMSHDL GQPVEKESPW SPIVWGNSMG GPLGEVLTSS TSGGAGASFS  480
SVKHSPQLGS SPTGVLKKST LVSLSNSSSG GSPTNAGNKA LCNELPGSAL ITCATIQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	6e-90	GRF family protein