PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY27298.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

HD-ZIP

Protein Properties

Length: 266aa MW: 29585.4 Da PI: 8.8292

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY27298.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	58.6	1.1e-18	120	174	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tk q Lee F+++++++ +++++LA++l+L rqV vWFqNrRa+ k TEY27298.1 120 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTK 174 678899***********************************************98 PP
2	HD-ZIP_I/II	122.8	1.7e-39	120	209	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rl+k q++lLEesF+++++L+p++K++lareL+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL+ +l TEY27298.1 120 RKKLRLTKAQSALLEESFKQHSTLNPKQKQDLARELKLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQELK-AL 209 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MGYDDLCNTG LVLGLGFSSS TTKKPSKNLD YITKTADPSL TLGLSGETYD LILKKADSAN 60 KSGGIFNDRH SADLYRQDSG ASSFSNVSVK REREIGSEEA EIERVSSRAS DEDDDGANGR 120 KKLRLTKAQS ALLEESFKQH STLNPKQKQD LARELKLRPR QVEVWFQNRR ARTKLKQTEV 180 DCEFLKKCCE TLTDENRRLQ KELQELKALK LAQPLYMQLP AATLTMCPSC ERIGGAAAET 240 AAKSSYVMAP TKPRFYNPFT NPSAAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	169	177	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	5e-88	HD-ZIP family protein