PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY27179.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 432aa    MW: 48636.2 Da    PI: 6.4062
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY27179.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS430.99.7e-132424271374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lLl+cA++v++g+ e+a++ L  + +l+sp+gd+mqR+aayfteALa r+++ +++l kal++++    + +e l +++lf+e +P+lk+s++++N
  TEY27179.1  42 LIHLLLACAKHVAAGSIENANTGLDYITHLSSPNGDTMQRIAAYFTEALADRVLKGWPGLHKALNSTKMI--SPAEDLLVHRLFFEFCPFLKLSYVITN 138
                 689*************************************************************999887..59999********************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 qaIlea+ege+ vHi+D+   +++QW++L+qaL++R egpp++RiTg+++    +k  le+++ rL++ Ae+l++pf+f++ ++++le+l++  Lrvk+
  TEY27179.1 139 QAILEAMEGEKVVHIVDLHCFEPAQWLSLIQALSTRMEGPPHVRITGIHH----EKSVLEQVAIRLNEEAEKLDLPFQFHP-IVSQLESLDVGCLRVKT 232
                 **************************************************....99*************************.799************** PP

        GRAS 199 gEalaVnlvlqlhrll.....................desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                 gEa+a++ vlqlh+ll                     ++s++ + +   +L+ + +lsPk+vvv+eqe++hn++ +++r++eal++y+alfd+le ++ 
  TEY27179.1 233 GEAVAISAVLQLHSLLafedakaskspngvllrdfldKDSLTAKPKMAGFLDGILGLSPKLVVVTEQESNHNGTGLMDRMMEALNFYAALFDCLEYTA- 330
                 ************************************98888888899*************************************************95. PP

        GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   se+r+k+E ++ grei+++vaceg err+rhe+le+W  r+e+aGF++v ls+++++qa++ll+ ++ dgy+v +++g++v++W+d+pL+svSaWr
  TEY27179.1 331 -PSEQRQKIESMVYGREIKDIVACEGVERRARHEKLERWIPRMESAGFGKVCLSYHVMMQARRLLHSYNYDGYKVRDQNGCFVICWQDQPLFSVSAWR 427
                 .789*********************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    
MVPEEASSSP LQMFSMMSLS PGLGSPYPWL REMESEERGL CLIHLLLACA KHVAAGSIEN  60
ANTGLDYITH LSSPNGDTMQ RIAAYFTEAL ADRVLKGWPG LHKALNSTKM ISPAEDLLVH  120
RLFFEFCPFL KLSYVITNQA ILEAMEGEKV VHIVDLHCFE PAQWLSLIQA LSTRMEGPPH  180
VRITGIHHEK SVLEQVAIRL NEEAEKLDLP FQFHPIVSQL ESLDVGCLRV KTGEAVAISA  240
VLQLHSLLAF EDAKASKSPN GVLLRDFLDK DSLTAKPKMA GFLDGILGLS PKLVVVTEQE  300
SNHNGTGLMD RMMEALNFYA ALFDCLEYTA PSEQRQKIES MVYGREIKDI VACEGVERRA  360
RHEKLERWIP RMESAGFGKV CLSYHVMMQA RRLLHSYNYD GYKVRDQNGC FVICWQDQPL  420
FSVSAWRFRP TR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein