PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY26089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 120aa MW: 13355.1 Da PI: 7.244 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 135.9 | 1.5e-42 | 10 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC ++C+++ yfpae+p+kfanvhk+FGasnv kllk+l +++reda++sl+yeAear+rdPvyG++g i+ lq+q ++l++el+ +++ TEY26089.1 10 PCAACKFLRRKCIAGCIFSAYFPAEEPQKFANVHKIFGASNVGKLLKELLPHQREDAVNSLAYEAEARVRDPVYGCIGAISFLQSQADRLQKELDDANA 108 7********************************************************************************************998776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MASSSSYNPP CAACKFLRRK CIAGCIFSAY FPAEEPQKFA NVHKIFGASN VGKLLKELLP 60 HQREDAVNSL AYEAEARVRD PVYGCIGAIS FLQSQADRLQ KELDDANADL FRFNDIYTSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 7e-67 | LBD family protein |