PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY26032.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 606aa MW: 67375.2 Da PI: 8.6027

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY26032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.5	1e-12	437	483	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h e+Er+RR+++N++f Lr ++P+ + K++Ka+ L A+ YI +Lq TEY26032.1 437 NHVEAERQRREKLNQRFYALRAVVPNiS------KMDKASLLGDAIAYITELQ 483 799*********************66......***************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 606 aa Download sequence
MGVVGWSNEE KAMAAAVLGT KAFDYLMSSS VSAECSLMAM GNNGNLQNKL ADLVERPNSS 60 NFCWNYAIFW QLSRSKSGHL VLGWGDGCCR EPREDEESEV TRILKMRLED ESQQTMRKRV 120 LQRLHTLFGG GDEENYAFGL DKVTDTEMFF LASMYFSFPR GEGGPGRCFG SSKHVWLSDA 180 LKSSVDYCVR SFLAKSAGMQ TMVLIPTDVG VVELGSVRCI PESMELIKVV GSSFSSFSSL 240 LRSKQAAAAA VPSVTNKKDT KGPIPNLAIG NRQEIVPKIF GQELNSSHVQ FRDNVSNRKP 300 EVQIRAWDSS GNRNKLPFAN NRNGFHGAKW TQYSNVKLGN AVEVYSPQTP AKKRAEIVNG 360 NREEFMINNF LNQKPAQMQI DFTGATSRPL TSYLQSLESE LSDVEASCKE EAAGLLEDKR 420 PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAIAYIT 480 ELQKKLNDME FERERLGSIS REASVSEVNS NRETQDLLAS SINIEAGREE VTVRVSCPLN 540 AHPASRVIQA INDAQSTIVD AKMATVSERV FHTFIVKSNG SEQLTKEKLV EAFSRRSSSP 600 HQLSLG

Sequence ? help Back to Top

Protein Sequence Length: 606 aa Download sequence

MGVVGWSNEE KAMAAAVLGT KAFDYLMSSS VSAECSLMAM GNNGNLQNKL ADLVERPNSS  60
NFCWNYAIFW QLSRSKSGHL VLGWGDGCCR EPREDEESEV TRILKMRLED ESQQTMRKRV  120
LQRLHTLFGG GDEENYAFGL DKVTDTEMFF LASMYFSFPR GEGGPGRCFG SSKHVWLSDA  180
LKSSVDYCVR SFLAKSAGMQ TMVLIPTDVG VVELGSVRCI PESMELIKVV GSSFSSFSSL  240
LRSKQAAAAA VPSVTNKKDT KGPIPNLAIG NRQEIVPKIF GQELNSSHVQ FRDNVSNRKP  300
EVQIRAWDSS GNRNKLPFAN NRNGFHGAKW TQYSNVKLGN AVEVYSPQTP AKKRAEIVNG  360
NREEFMINNF LNQKPAQMQI DFTGATSRPL TSYLQSLESE LSDVEASCKE EAAGLLEDKR  420
PRKRGRKPAN GREEPLNHVE AERQRREKLN QRFYALRAVV PNISKMDKAS LLGDAIAYIT  480
ELQKKLNDME FERERLGSIS REASVSEVNS NRETQDLLAS SINIEAGREE VTVRVSCPLN  540
AHPASRVIQA INDAQSTIVD AKMATVSERV FHTFIVKSNG SEQLTKEKLV EAFSRRSSSP  600
HQLSLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	419	427	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01260.1	0.0	bHLH family protein