PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25601.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 880aa MW: 99781.4 Da PI: 6.6953

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.7e-12	686	733	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+h Er+RR++iN++f L +l+P+ +K +K+++L +++e++++L+ TEY25601.1 686 RNHVLSERKRREKINERFMILGSLVPSG-----GKADKVSVLDHTIEHLRKLE 733 679999******************98.....8**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MGGGEVDRST SNLWLAHNPS KRWAELFFLI YTPFWLTLCL GIVVPYKLYE NFTEWEYLLL 60 GLVSALPAFI IPMVFVGKAD RSLCWKDRYW VKLKVIMETV LQVPHTTFLL THVCFLFYHV 120 SSNMTLRRIQ HSVAHLPETT QWLFKASWIL ILSYFVAYLE TVAISNFPYY EFVDRAVMYK 180 VGCLFYAIYF FVSFPMFFRI DEEPSDAWDL PRVAVDALGA AMLVTIILDL WRIFLGPIVP 240 IPESKQCHQP GLPWFPLSAF NICLGGEREW SIMATGNQNQ KEMPQNLRTH LALAVQSFQW 300 SYAIFWSVSC IQPGMLEWCE GYYNGDIKTR KTVQVAEVDM DQLGLQRSDQ LRELYVSLSL 360 GDTKPQAKRP TTALSPEDLT DAEWLPGRTL AANQMIWLCN AHRADTKVFS RSLLAKSASI 420 KTIVCFPHSG GVVELGTTEL VPEDPSLIRH ISSFLESPSV AVPLIPNLVF DSSSCNPNGL 480 NLERLDHAHM LEDGLDRLMD DPYMEMCSPY NSSDDFANNL LREESNLVEG VGGEASKLQS 540 WPVMEDAVSN CLNNSVNSSD CVSQTEGELE KVIPHSDGNK EKKSCVQECN QKTPSEGQGN 600 DVHYHSVLSY LLKSSHQLIL GPYIRNGSTE SSFVFWRKVG VPGPQRGTTP QKLLKKVLFE 660 VARLHQSCRG ESDKHRICPK SDEADRNHVL SERKRREKIN ERFMILGSLV PSGGKADKVS 720 VLDHTIEHLR KLERRVEELE SYKEAMERES TTHSKSQDAI ERTSDNYRDD NNSKRPAMNK 780 RKAGHRDKTG PRLRDSSPTD NITISVSNKV VLIEMRCLFK EHVLFEVMEM LSKIHLETQT 840 IQSSTIDGTL SITVNAKCEG LKSPSAVVIK EALQKIISKC

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MGGGEVDRST SNLWLAHNPS KRWAELFFLI YTPFWLTLCL GIVVPYKLYE NFTEWEYLLL  60
GLVSALPAFI IPMVFVGKAD RSLCWKDRYW VKLKVIMETV LQVPHTTFLL THVCFLFYHV  120
SSNMTLRRIQ HSVAHLPETT QWLFKASWIL ILSYFVAYLE TVAISNFPYY EFVDRAVMYK  180
VGCLFYAIYF FVSFPMFFRI DEEPSDAWDL PRVAVDALGA AMLVTIILDL WRIFLGPIVP  240
IPESKQCHQP GLPWFPLSAF NICLGGEREW SIMATGNQNQ KEMPQNLRTH LALAVQSFQW  300
SYAIFWSVSC IQPGMLEWCE GYYNGDIKTR KTVQVAEVDM DQLGLQRSDQ LRELYVSLSL  360
GDTKPQAKRP TTALSPEDLT DAEWLPGRTL AANQMIWLCN AHRADTKVFS RSLLAKSASI  420
KTIVCFPHSG GVVELGTTEL VPEDPSLIRH ISSFLESPSV AVPLIPNLVF DSSSCNPNGL  480
NLERLDHAHM LEDGLDRLMD DPYMEMCSPY NSSDDFANNL LREESNLVEG VGGEASKLQS  540
WPVMEDAVSN CLNNSVNSSD CVSQTEGELE KVIPHSDGNK EKKSCVQECN QKTPSEGQGN  600
DVHYHSVLSY LLKSSHQLIL GPYIRNGSTE SSFVFWRKVG VPGPQRGTTP QKLLKKVLFE  660
VARLHQSCRG ESDKHRICPK SDEADRNHVL SERKRREKIN ERFMILGSLV PSGGKADKVS  720
VLDHTIEHLR KLERRVEELE SYKEAMERES TTHSKSQDAI ERTSDNYRDD NNSKRPAMNK  780
RKAGHRDKTG PRLRDSSPTD NITISVSNKV VLIEMRCLFK EHVLFEVMEM LSKIHLETQT  840
IQSSTIDGTL SITVNAKCEG LKSPSAVVIK EALQKIISKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	692	697	ERKRRE
2	693	698	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-129	bHLH family protein