PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY25506.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 903aa MW: 100742 Da PI: 8.3406

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY25506.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.4	3e-21	810	890	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W +e+++Li++r e+++r++ +k +++lWee+s+++ + g++rsp qCk+ w +l ++y++ k +++r s++pyf++l+ TEY25506.1 810 KWRPEEIKKLIKVRGELHNRFQVQKGRMALWEEISSNLLADGVSRSPGQCKSLWTSLVQKYEESKSDKQNR-----SSWPYFQDLD 890 7*************************************************************9999986.....57****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 903 aa Download sequence
MAALSAISLC PNKLFWCQPK PRRRFITCCV SVPSVKGVLH YNSILFCVFV LALICVEFGA 60 RGSMVPNRRY GRREGAGKSM EDSVKRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN 120 YDRYILIDAG IMFPDYDELG IQKIIPDTTF IKKWSHKIEA VVITHGHEDH IGALPWVIPA 180 LDSHTPIFAS SFTMELIKKR LKEFGMFLPS RLKVFNTRRR FVAGPFEVEP IRVTHSIPDC 240 CGLVFRCADG TILHTGDWKI DEAPLDGNVF DREALEELSK EGVTLMMSDS TNVLSPGRTL 300 SETVVADSLL RHISAAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA 360 WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASHGSS HSLKLNKEDL 420 ILYSAKVIPG NETRVMKMMN RLAEIGPQIV MGKNELLHTS GHAHREELDE VLKIVKPQHF 480 LPIHGELLFL KEHELLGRST GVRHTTVIKN GEMLGVSHLR NRRVLSNGFI ALGKENLQLM 540 YSDGDKAFGT ATELCIDERM RIASDGIIVV SLAYQCSMEI MRPDGSVEKT LKGKIRITTR 600 CLWLDKGKLL DALHKAAHAV LSSCPVSCPL AHMERIVSEV LRKMVRKYSS KRPEVIAIAI 660 ENPVGVVADE INEKLSGKAH INPEFSASRK AIDRHEKRKQ PIARREEDGN DFAFEKSTSV 720 QELEDQDFDE VRGEIAASNS RLPDRAPKTD ESDNFWKPFV SSSEPVQAEP NGELLPAAEV 780 KEKGEDERSE VDPGLPDQRA KSSKTVKRNK WRPEEIKKLI KVRGELHNRF QVQKGRMALW 840 EEISSNLLAD GVSRSPGQCK SLWTSLVQKY EESKSDKQNR SSWPYFQDLD NILSSLETSG 900 SSK

Sequence ? help Back to Top

Protein Sequence Length: 903 aa Download sequence

MAALSAISLC PNKLFWCQPK PRRRFITCCV SVPSVKGVLH YNSILFCVFV LALICVEFGA  60
RGSMVPNRRY GRREGAGKSM EDSVKRKMEQ FYEGSDGPPL RVLPIGGLGE IGMNCMLVGN  120
YDRYILIDAG IMFPDYDELG IQKIIPDTTF IKKWSHKIEA VVITHGHEDH IGALPWVIPA  180
LDSHTPIFAS SFTMELIKKR LKEFGMFLPS RLKVFNTRRR FVAGPFEVEP IRVTHSIPDC  240
CGLVFRCADG TILHTGDWKI DEAPLDGNVF DREALEELSK EGVTLMMSDS TNVLSPGRTL  300
SETVVADSLL RHISAAKGRV ITTQFASNIH RLGSVKAAAD LTGRKLVFVG MSLRTYLDAA  360
WKDGKAPIDP STLVKVEDID AYAPKDLLIV TTGSQAEPRA ALNLASHGSS HSLKLNKEDL  420
ILYSAKVIPG NETRVMKMMN RLAEIGPQIV MGKNELLHTS GHAHREELDE VLKIVKPQHF  480
LPIHGELLFL KEHELLGRST GVRHTTVIKN GEMLGVSHLR NRRVLSNGFI ALGKENLQLM  540
YSDGDKAFGT ATELCIDERM RIASDGIIVV SLAYQCSMEI MRPDGSVEKT LKGKIRITTR  600
CLWLDKGKLL DALHKAAHAV LSSCPVSCPL AHMERIVSEV LRKMVRKYSS KRPEVIAIAI  660
ENPVGVVADE INEKLSGKAH INPEFSASRK AIDRHEKRKQ PIARREEDGN DFAFEKSTSV  720
QELEDQDFDE VRGEIAASNS RLPDRAPKTD ESDNFWKPFV SSSEPVQAEP NGELLPAAEV  780
KEKGEDERSE VDPGLPDQRA KSSKTVKRNK WRPEEIKKLI KVRGELHNRF QVQKGRMALW  840
EEISSNLLAD GVSRSPGQCK SLWTSLVQKY EESKSDKQNR SSWPYFQDLD NILSSLETSG  900
SSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein