PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24593.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 401aa MW: 46390.8 Da PI: 6.7951

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	95	7.2e-30	60	145	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l L+e+r++++ +++++++k+plW+evs+ m +e+g++rs+k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea TEY24593.1 60 RWPRQETLNLLEIRSRLDPKFKEANQKGPLWDEVSRIMcEEHGYQRSSKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 145 8*********************************998***************************98..55667*****85 PP
2	trihelix	43.3	9.3e-14	301	369	2	74
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtse 74 W++ e+ +Li++++ me ++ ++ Wee+++km g ers+ Ckekwe+++++ k ++ +++++ + TEY24593.1 301 WPECEINKLIQLTTAMEGKFDEE----MVWEEIAAKMGCFGHERSAAACKEKWESIHNYVSKKRKDNNNNNYQ 369 ******************987....89****************************98888888875333 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MEYQYGMPDL RHSITGRPLF PQIQSPQDLL STHRPHDMLI FTSDSAAAAG NAFENGGAGR 60 WPRQETLNLL EIRSRLDPKF KEANQKGPLW DEVSRIMCEE HGYQRSSKKC REKFENLYKY 120 YKKTKEGKAG RQDGKHYRFF RQLEALYGTT EANISSVSIS EAAAAHHTFP NKTAAGDPTP 180 KASDTSLSLS NYSDADTSSS DDSDDMKKSG WKVKIRDFID AQMKKVMEKQ EAWMEKMMRT 240 IEEKERERAM REEEWRKHDA ARIEREHRFW ASERAWIEAR DAALMNALHK LTGKESHNED 300 WPECEINKLI QLTTAMEGKF DEEMVWEEIA AKMGCFGHER SAAACKEKWE SIHNYVSKKR 360 KDNNNNNYQS HIYCEQGLNN DHGSSSGISE SCFRYFMGDA Y

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MEYQYGMPDL RHSITGRPLF PQIQSPQDLL STHRPHDMLI FTSDSAAAAG NAFENGGAGR  60
WPRQETLNLL EIRSRLDPKF KEANQKGPLW DEVSRIMCEE HGYQRSSKKC REKFENLYKY  120
YKKTKEGKAG RQDGKHYRFF RQLEALYGTT EANISSVSIS EAAAAHHTFP NKTAAGDPTP  180
KASDTSLSLS NYSDADTSSS DDSDDMKKSG WKVKIRDFID AQMKKVMEKQ EAWMEKMMRT  240
IEEKERERAM REEEWRKHDA ARIEREHRFW ASERAWIEAR DAALMNALHK LTGKESHNED  300
WPECEINKLI QLTTAMEGKF DEEMVWEEIA AKMGCFGHER SAAACKEKWE SIHNYVSKKR  360
KDNNNNNYQS HIYCEQGLNN DHGSSSGISE SCFRYFMGDA Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10000.1	3e-67	Trihelix family protein