PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY24380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 184aa MW: 20543.5 Da PI: 9.318 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 50.5 | 8.3e-16 | 6 | 57 | 5 | 56 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql 56 se+vCy++C+fCnt+lav +P + l+ ++tv+CGhC+sl ++ + +s++ TEY24380.1 6 PVSENVCYIRCTFCNTVLAVGIPCKRLLDTLTVKCGHCSSLSFLSTKPQSHQ 57 679************************************9977776666654 PP | |||||||
2 | YABBY | 92.9 | 7.9e-29 | 73 | 135 | 101 | 163 |
YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 s++++ ++p++p v++PPek+ r Psaynrf+keeiqrik++nP+i hre fs+aaknWa + TEY24380.1 73 SSTSTEPSSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKSANPEIPHREDFSVAAKNWARY 135 26777888999999***********************************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 184 aa Download sequence |
MDLAQPVSEN VCYIRCTFCN TVLAVGIPCK RLLDTLTVKC GHCSSLSFLS TKPQSHQAFC 60 SEFKKVPSLS SSSSTSTEPS SPKAPFVVKP PEKKHRLPSA YNRFMKEEIQ RIKSANPEIP 120 HREDFSVAAK NWARYIPNPN PHQTSTASTS TNKMYFYQMS LINMDGNWSG AKADQEKVGC 180 FKTI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G69180.1 | 2e-55 | YABBY family protein |