PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24313.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 493aa MW: 53608.4 Da PI: 6.774

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24313.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.9	1.3e-18	87	173	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea++e+ +l+rg+l++ +Weev++ + r + ++s +qCk+k +nl+kryk ++++ +++ +s ++p+f+q+e TEY24313.1 87 EWSDTAISCLLEAYSEKFVQLNRGNLRGRDWEEVAAMVseRCENQSKSVEQCKNKVDNLKKRYKLERHRLSNGGVLTS-HWPWFKQME 173 5***********************************666677899*********************966665.9*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MAACDDDFSL LDDPLNPNSA PPSTATASAS PYQINPYEHD SDPFDSDPNS LSTKRLTDRD 60 DIHSGTSKRT RLPSSASAGD YRKDREEWSD TAISCLLEAY SEKFVQLNRG NLRGRDWEEV 120 AAMVSERCEN QSKSVEQCKN KVDNLKKRYK LERHRLSNGG VLTSHWPWFK QMEQIVGNSI 180 AAKAAVEEEK SSGAGGVSYS TRQTKRLGTI VNCSGSQINS MKLKPSNNLR WRRVVLKISG 240 AALAGSAPNN IEPKVAMLIA TEVSIACHVG VQVAIVVGGR NFFCGDAWVE QTGLDRCTAY 300 QIGFAEAVYG SYLSSFTDPT MASTIRMMAT VMNSVLLQSA LEKLGVQTRV QSAFSMPEVA 360 EPYSRQRAIR HLEKGRVVIF GGIGSGTGNP LFSTDTAAAL RASEIHADAV LKGTNMEGVY 420 VCDARNNSIA AEHISFRELA SRGAFPMDMM AVTFCEENGI PVGIFNLHEP GNISRALCGE 480 RVGTLIDQTG PVT

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MAACDDDFSL LDDPLNPNSA PPSTATASAS PYQINPYEHD SDPFDSDPNS LSTKRLTDRD  60
DIHSGTSKRT RLPSSASAGD YRKDREEWSD TAISCLLEAY SEKFVQLNRG NLRGRDWEEV  120
AAMVSERCEN QSKSVEQCKN KVDNLKKRYK LERHRLSNGG VLTSHWPWFK QMEQIVGNSI  180
AAKAAVEEEK SSGAGGVSYS TRQTKRLGTI VNCSGSQINS MKLKPSNNLR WRRVVLKISG  240
AALAGSAPNN IEPKVAMLIA TEVSIACHVG VQVAIVVGGR NFFCGDAWVE QTGLDRCTAY  300
QIGFAEAVYG SYLSSFTDPT MASTIRMMAT VMNSVLLQSA LEKLGVQTRV QSAFSMPEVA  360
EPYSRQRAIR HLEKGRVVIF GGIGSGTGNP LFSTDTAAAL RASEIHADAV LKGTNMEGVY  420
VCDARNNSIA AEHISFRELA SRGAFPMDMM AVTFCEENGI PVGIFNLHEP GNISRALCGE  480
RVGTLIDQTG PVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein