PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY24307.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 407aa MW: 46618 Da PI: 7.7909

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY24307.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.9	7.7e-30	79	164	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++ +++++++k plW+evs+ m +e+g++rs+k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea TEY24307.1 79 RWPRQETLTLLEIRSRLDPKFKEANQKTPLWDEVSRIMsQEHGYHRSSKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 164 8***********************************99**************************98..55667*****85 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MEDQYGMGDL RRYIDGRPHF PAISQPPDFP SCHRSSYPYD MLIFRQSDST GIAPSADGAA 60 LISFDGGTAS GGGDGGAGRW PRQETLTLLE IRSRLDPKFK EANQKTPLWD EVSRIMSQEH 120 GYHRSSKKCR EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGTNN SSSASHFYNN 180 FPSSNDQEPY PLSKISDSSL PDWCDCDATS SHCTDSNVED ARMKKRRGKM RRRLKEEIEA 240 SIKAQMRGMM EKQEAWMQKM TRAIEGKEQE RLVREEQWRR QDAARIDGEH KMWAKEKAWI 300 EARDATLMEA FNKLAAREIQ PPGSGIEENG ISEELAWDEM AGSLMCREKW DHLINDYLIK 360 CSKKKKEGNA CDHNRDSISN HGGGAAVDPA ANDGLFRYFN GDSYQRL

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MEDQYGMGDL RRYIDGRPHF PAISQPPDFP SCHRSSYPYD MLIFRQSDST GIAPSADGAA  60
LISFDGGTAS GGGDGGAGRW PRQETLTLLE IRSRLDPKFK EANQKTPLWD EVSRIMSQEH  120
GYHRSSKKCR EKFENLYKYY KKTKEGKAGR QDGKHYRFFR QLEALYGTNN SSSASHFYNN  180
FPSSNDQEPY PLSKISDSSL PDWCDCDATS SHCTDSNVED ARMKKRRGKM RRRLKEEIEA  240
SIKAQMRGMM EKQEAWMQKM TRAIEGKEQE RLVREEQWRR QDAARIDGEH KMWAKEKAWI  300
EARDATLMEA FNKLAAREIQ PPGSGIEENG ISEELAWDEM AGSLMCREKW DHLINDYLIK  360
CSKKKKEGNA CDHNRDSISN HGGGAAVDPA ANDGLFRYFN GDSYQRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	223	230	MKKRRGKM
2	224	229	KKRRGK
3	224	235	KKRRGKMRRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	2e-77	Trihelix family protein