PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY23968.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 168aa MW: 18473.8 Da PI: 8.2174 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 140.9 | 4e-44 | 12 | 111 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C++dCv+apyfpae+p kfa vhk+FGasnv+k+l++lpee+r da+ss+vyeA+ar+rdPvyG+vg i+ lqqq++ l+++la++++ TEY23968.1 12 PCAACKLLRRRCSRDCVFAPYFPAEEPGKFAGVHKVFGASNVSKMLQELPEEHRGDAVSSMVYEANARMRDPVYGCVGAISYLQQQIDGLRQQLAQTQA 110 7**********************************************************************************************9998 PP DUF260 100 e 100 e TEY23968.1 111 E 111 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
MEVSRKQNAS SPCAACKLLR RRCSRDCVFA PYFPAEEPGK FAGVHKVFGA SNVSKMLQEL 60 PEEHRGDAVS SMVYEANARM RDPVYGCVGA ISYLQQQIDG LRQQLAQTQA EILHLRVPQA 120 TSHPATSPNY SGSQLSYTFV SHSKPSSYGL DAGAVEHATF RESMWSST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G31320.1 | 5e-64 | LBD family protein |