PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY23607.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 268aa MW: 28865.3 Da PI: 10.1459

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY23607.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.8	3.9e-38	26	213	2	109
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.......... 88 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ +++s++ss+s + TEY23607.1 26 PVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStvSPSSRNSSSS---LSaaldhkplah 121 789*************************************************************99999777553333333333...112345556777 PP TCP 89 .......................................................................kaaksaakskksqksaasaln 109 ++++s+++++++q+++++ l TEY23607.1 122 slltptpfilgkrlrpddddhhqhlskddvtsvsasvgptitaggfwalpartdfgqvwsfaapppemvvtASNNSHHQQHHQQQQHSASLR 213 77777777777777777777777777777777777777777777777777777777777777777777775444444444444444444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MSTSAADASI VDPSQRHLQL QTVPAPVKKP PAKDRHSKVD GRGRRIRMPI ICAARVFQLT 60 RELGHKSDGQ TIEWLLRQAE PSIIAATGTG TTPASFSTVS PSSRNSSSSL SAALDHKPLA 120 HSLLTPTPFI LGKRLRPDDD DHHQHLSKDD VTSVSASVGP TITAGGFWAL PARTDFGQVW 180 SFAAPPPEMV VTASNNSHHQ QHHQQQQHSA SLRFLQQHQP LGIGEASAAR VGNYLPIAQV 240 QGHHLNLLAS LSGPPPQSSE QRRDADAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-60	TCP family protein