PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY23294.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family ARF
Protein Properties Length: 879aa    MW: 97056.3 Da    PI: 6.2325
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY23294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.36.8e-24127228199
                 EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                 f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d+++++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +l
  TEY23294.1 127 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHNNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNEKNQL 221
                 99*****************************8544444..48************************************************..8899999 PP

                 EEEEE-S CS
          B3  93 vvkvfrk 99 
                 +++++r+
  TEY23294.1 222 LLGIRRA 228
                 ****997 PP
2Auxin_resp1201.8e-39253336183
  Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                 aahaa+t+s F+++YnPras+seFv++++k+ ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sd+dpvrWpnS+Wrs+k
  TEY23294.1 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVHhTRVSVGMRFRMLFETEESSVRRYMGTITGISDSDPVRWPNSHWRSVK 336
                 79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 879 aa     Download sequence    
MKLSACLNQQ SPEGEKSCLN SELWHACAGP LVSLPSLGSH VVYFPQGHSE QVAVSTNKEV  60
DAQMPNYQSL PAQLVCQLHN VTMHADIETD EVYAQMTLQP LNAQEQKEVS FLPADMGVAS  120
KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHNNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQTVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVIPL AKYIKAVHHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DSDPVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFP LRLKRPWPSG LPSYAGMKID DMGLNPSLMW LRGDGGMQAL NQGMGVSPWM  420
QPRFDASMLG LQNDIYHAMA AAAMQDMRVM DPSKQILSSI MQFQQPQSIG SRSAGYMQQP  480
LSSAPFVQSL QGIQSQAMSQ SQANLLQQNS FNEAQIHQQQ HQHSNQTQQV VDPQLSQLSS  540
NSQVQSQTMH SMSSMQQCFP ESNVKPVGNM SSPLHSLLSS VTQEEASNLL NVSRSNNLLS  600
SSGWPTKRVA LDPLSSGIPS QTISPQADQL GLLNSNATSN PVSLPPFPSR DCLMEQEANN  660
DPHNHFLFGV NIDSSSLLMP NGLSNLKAVS EPDNAAMTFA SSSYMTSSGA DYSLNPTVTS  720
SSFIDDSGFL ISNDNGGHND PSDRTFVKVH KTGSFGRSLD ITKFSSYSEL RSELAQMFGL  780
EGELEDPLRS GWQLVFVDRE NDVLLLGDDP WQEFVNSVWC IKILSPQEVQ EMGKLGLELL  840
NSIPLQRLPV QNGGCDSYGS RQEGRNMSTV IPSVGSLDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein