PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY23106.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 310aa    MW: 33863.3 Da    PI: 9.5123
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY23106.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH34.24.2e-11144170127
                 --S---SGGGGTS--TTTTT-SS-SSS CS
     zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHgp 27 
                 yk +lC+++  + +C++G+ C+FaHg+
  TEY23106.1 144 YKNRLCHYWETSRICQFGSECQFAHGK 170
                 899**********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MHRMYLENKR NTKGPKFDSS VLSPITLMNM TGSRRSRSLF DPYASDSSDS PSPLMKFLRS  60
VDPAARGASS PVFVTPVKVE EDVIVMDGIS VPKSNSSSGE ARLRLPLMSS NSVNCSFGKS  120
NSTASSSSSG SGGRRARVEN IKSYKNRLCH YWETSRICQF GSECQFAHGK EELRHHRFSG  180
KIKLEISKLN SSFEGSSPSP YSSKFNRNSR VNAASAEVEA FSLPPLSPDM AFPASPIPAK  240
RVSGTRAIPV TTLLYSDWTP ESDGIEITLP CVEKSPSKED VDAYIANVLY GAKAKKRLPV  300
FVEICPDSAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32360.13e-08C3H family protein