PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY22640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 512aa MW: 55104.8 Da PI: 7.5076 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 38.7 | 1.7e-12 | 72 | 97 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 +++ C +++rtG+C yG+rC+F+H++ TEY22640.1 72 DEPDCIYYLRTGICGYGNRCRFNHPR 97 6899********************96 PP | |||||||
2 | zf-CCCH | 37.7 | 3.4e-12 | 119 | 143 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++ C++++rtG Ck+G++Ck++H++ TEY22640.1 119 EPVCQYYMRTGMCKFGASCKYHHPK 143 789********************96 PP | |||||||
3 | zf-CCCH | 34.8 | 2.8e-11 | 164 | 189 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C+++ rtG+Ck+G +CkF+H++ TEY22640.1 164 GEKECSYYIRTGQCKFGVTCKFHHPQ 189 6789********************97 PP | |||||||
4 | zf-CCCH | 36.7 | 6.8e-12 | 334 | 360 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++++C++++rtG Ck+G +Ck++H+p TEY22640.1 334 PGQPECQYYLRTGDCKFGVTCKYHHPP 360 5789*********************97 PP | |||||||
5 | zf-CCCH | 36.6 | 7.5e-12 | 382 | 406 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +lC+++a++G Ck+G++CkF H++ TEY22640.1 382 APLCSHYAQNGVCKFGPSCKFDHPM 406 68*********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence |
MDRYSATQAM EPRSVDPAAE WTRPGGEIGL EGELHLRVWI MLIDLRFDFV NAEPMWRLGL 60 GDGSESYPER PDEPDCIYYL RTGICGYGNR CRFNHPRDRS AVMGDLRDTG GEYPERHGEP 120 VCQYYMRTGM CKFGASCKYH HPKHGTGSSS PLTLNFYGYP LRQGEKECSY YIRTGQCKFG 180 VTCKFHHPQP AGIQMPTPSA GPGPLAGPAI MPTPTLYSTV QSPSVQSSQQ YGVLHGNWPV 240 PRPTMLPGSY VPGSYAPMLL TPGGVPVPGW NPYSAQVSPG ALQSTQPTIG ASPVYGIPRL 300 PPSTTTYMGA HLSGTSLAGP SSSSQKEHTF PDRPGQPECQ YYLRTGDCKF GVTCKYHHPP 360 EWSTQKSFVL LSPTGLPMRP GAPLCSHYAQ NGVCKFGPSC KFDHPMRALS YSTSASSLTD 420 MPVAPYPVGS TNATLAPSSS SSLDLRPELL SGFSTDASSN LSSANSSSAS IGSTFSRSGA 480 IPEFGIHHFE QGIASSIGGS SSNQEGEAKI SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47850.1 | 1e-135 | C3H family protein |