PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY21867.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

AP2

Protein Properties

Length: 461aa MW: 51388.9 Da PI: 6.8265

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY21867.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.4	6.2e-17	139	188	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++g+W+++I+d + k+++lg f+ta Aa+a+++a+ k++g TEY21867.1 139 SQYRGVTFYRRTGSWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 188 78*****************......55**********************998 PP
2	AP2	36.1	1.6e-11	231	291	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpseng....kr...krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + + k+ +++lg f+++ +Aa+a+++a+ k +g TEY21867.1 231 SKYRGVTLHK-CGRWEARMGQFLGKKsdasKTtriSYIYLGLFDSEIDAARAYDKAAIKCNG 291 89******.7**88854422456733457******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MFNLNLAIDP PAPTADRAET ASDNHFALSG DHVEYSGSSS SSVVNVETSS TAGDDNSLSV 60 GFDIWKSSGE CEESEKSSCG YVTKEFFPVK FGEGRIQCLD LPEKSCELTE QRILAQEQQQ 120 QQKRQLVKKS RRGPRSRSSQ YRGVTFYRRT GSWESHIWDC GKQVYLGGFD TAHAAARAYD 180 RAAIKFRGLD ADINFNVSDY DEDLKQMRNL TKEEFVHILR RQSTGFARGS SKYRGVTLHK 240 CGRWEARMGQ FLGKKSDASK TTRISYIYLG LFDSEIDAAR AYDKAAIKCN GREAVTNFDP 300 STYEEELSSE APVGGDMHNL DLNLGIAPPT ERAHWDIHHM QTENFQINYG SNNLPENRLK 360 GSASASVAAQ IPHEYGNVCQ YPLMWRGADP CFRPVYTGTT IGKLVEVDPS ANWTRDHHPS 420 PLFSTAASSG FATSSAAIHH HQLPTPPPVT TLNDGSRLYW R

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MFNLNLAIDP PAPTADRAET ASDNHFALSG DHVEYSGSSS SSVVNVETSS TAGDDNSLSV  60
GFDIWKSSGE CEESEKSSCG YVTKEFFPVK FGEGRIQCLD LPEKSCELTE QRILAQEQQQ  120
QQKRQLVKKS RRGPRSRSSQ YRGVTFYRRT GSWESHIWDC GKQVYLGGFD TAHAAARAYD  180
RAAIKFRGLD ADINFNVSDY DEDLKQMRNL TKEEFVHILR RQSTGFARGS SKYRGVTLHK  240
CGRWEARMGQ FLGKKSDASK TTRISYIYLG LFDSEIDAAR AYDKAAIKCN GREAVTNFDP  300
STYEEELSSE APVGGDMHNL DLNLGIAPPT ERAHWDIHHM QTENFQINYG SNNLPENRLK  360
GSASASVAAQ IPHEYGNVCQ YPLMWRGADP CFRPVYTGTT IGKLVEVDPS ANWTRDHHPS  420
PLFSTAASSG FATSSAAIHH HQLPTPPPVT TLNDGSRLYW R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	8e-95	AP2 family protein