PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY21678.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 233aa MW: 24950.3 Da PI: 8.4727 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 134.1 | 5.4e-42 | 51 | 150 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+Ca++C+++pyf ++p+kfa+vhk+FGasnv+k+l ++pe +r d+++slvyeA++r+rdPvyG++g i++lqqq+++l+ael+++++ TEY21678.1 51 PCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLMEVPEPQRADTANSLVYEANVRLRDPVYGCMGAISALQQQIQSLQAELNAVRA 149 7***********************************************************************************************998 PP DUF260 100 e 100 e TEY21678.1 150 E 150 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MSREREGFEE IGKKLKTEID GGKSSSPPPL SMSMGRRHTF GTPGSLNTIT PCAACKLLRR 60 RCAEECPFSP YFSPHEPHKF AAVHKVFGAS NVSKMLMEVP EPQRADTANS LVYEANVRLR 120 DPVYGCMGAI SALQQQIQSL QAELNAVRAE ILRYKYREAA NSIIASTNAA LAVSVAELPQ 180 APPTPTPSQT APAAAPPPSV VISSTSSAPA LYASPSSTAS YSSISNNHIP FFD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40470.1 | 5e-74 | LBD family protein |