PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY21590.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | C3H | ||||||||
Protein Properties | Length: 512aa MW: 54976.9 Da PI: 8.1665 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 38.7 | 1.7e-12 | 72 | 97 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 +++ C +++rtG+C yG+rC+F+H++ TEY21590.1 72 DEPDCIYYLRTGICGYGNRCRFNHPR 97 6899********************96 PP | |||||||
2 | zf-CCCH | 37.7 | 3.4e-12 | 119 | 143 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 ++ C++++rtG Ck+G++Ck++H++ TEY21590.1 119 EPVCQYYMRTGMCKFGASCKYHHPK 143 789********************96 PP | |||||||
3 | zf-CCCH | 34.6 | 3.2e-11 | 164 | 189 | 2 | 27 |
-S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 2 ktelCrffartGtCkyGdrCkFaHgp 27 ++++C+++ +tG+Ck+G +CkF+H++ TEY21590.1 164 GEKECSYYIKTGQCKFGVTCKFHHPQ 189 6789********************97 PP | |||||||
4 | zf-CCCH | 36.7 | 6.8e-12 | 334 | 360 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 +++++C++++rtG Ck+G +Ck++H+p TEY21590.1 334 PGQPECQYYLRTGDCKFGVTCKYHHPP 360 5789*********************97 PP | |||||||
5 | zf-CCCH | 36.6 | 7.5e-12 | 382 | 406 | 3 | 27 |
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +lC+++a++G Ck+G++CkF H++ TEY21590.1 382 APLCSHYAQNGVCKFGPSCKFDHPM 406 68*********************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 512 aa Download sequence |
MDRYSATQSM EPRSVDPAAE WTRPGGEIGL EGELHLRVWI MLIDLRFVFV NAEPMWRLGL 60 GDGSKSYPER PDEPDCIYYL RTGICGYGNR CRFNHPRDRS AVMGDLRATG GEYPERHGEP 120 VCQYYMRTGM CKFGASCKYH HPKHGAGSSS PLTLNFYGYP LRQGEKECSY YIKTGQCKFG 180 VTCKFHHPQP AGIQIPTPSA GPGPLAGPAI MPTPTLYPTL QSPSVQSSQQ YGVLHGNWPV 240 PRPTMLPGSY VPGSYAPMLL TPGGVPVPGW NPYSAQVSPG ALQSTQPTVG TGPVYGIPRL 300 PPSTTTYMGA HLSGTSLAGP SSSSQKEHTF PDRPGQPECQ YYLRTGDCKF GVTCKYHHPP 360 EWSTQKSFVL LSPMGLPMRP GAPLCSHYAQ NGVCKFGPSC KFDHPMRALS YSTSASSLTD 420 MPVAPYPVGS TNATLAPSSS SSLDLRPELL SGFSKDASSN LSSANSSSAS IGSTFSRSGA 480 IPEFGIHHSE QGIASSVGGS SSNQEGEAKI SS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47850.1 | 1e-140 | C3H family protein |