PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY20769.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 360aa MW: 40030.2 Da PI: 9.5716

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY20769.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.9	2e-06	52	74	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k F+r nL+ H r H TEY20769.1 52 FVCDVCNKGFKRDQNLQLHRRGH 74 89*******************88 PP
2	zf-C2H2	12.5	0.00044	128	150	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + TEY20769.1 128 WKCEKCSKKYAVQSDWKAHSKIC 150 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MSNLTCVASL SSNSSNLTQQ PTKKRRNQPG HPEPGAEVIA LSPRSLMATN RFVCDVCNKG 60 FKRDQNLQLH RRGHNLPWKL KQKSKKEAGR KVYICPEIGC VHHDPSRALG DLTGIKKHFY 120 RKHGEKKWKC EKCSKKYAVQ SDWKAHSKIC GTREYRCECG TLFSRRDSFV THRAFCDALS 180 QEAGGSNPLS ININKQEIPA WLSSINPSSS IWPSGYHHQL PSHFSATALL QKDAQMGAKS 240 SSQQFPSPFT TPHQAGHVTP IPTEGFGATR DQLVHSLASY EDKAASTAPL AHDQMMMMMM 300 NKNNAAGFHQ GSDDHVFAGG FNGTRDFLGL RPLSQNDILS LTGFDSCINS NSCDQNPKYW

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MSNLTCVASL SSNSSNLTQQ PTKKRRNQPG HPEPGAEVIA LSPRSLMATN RFVCDVCNKG  60
FKRDQNLQLH RRGHNLPWKL KQKSKKEAGR KVYICPEIGC VHHDPSRALG DLTGIKKHFY  120
RKHGEKKWKC EKCSKKYAVQ SDWKAHSKIC GTREYRCECG TLFSRRDSFV THRAFCDALS  180
QEAGGSNPLS ININKQEIPA WLSSINPSSS IWPSGYHHQL PSHFSATALL QKDAQMGAKS  240
SSQQFPSPFT TPHQAGHVTP IPTEGFGATR DQLVHSLASY EDKAASTAPL AHDQMMMMMM  300
NKNNAAGFHQ GSDDHVFAGG FNGTRDFLGL RPLSQNDILS LTGFDSCINS NSCDQNPKYW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	9e-94	C2H2 family protein