PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY20396.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 489aa    MW: 55842.6 Da    PI: 7.5398
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY20396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS374.71.2e-1141164852374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  +lL++cA+av++ d++ ++ lLa+++ ++sp+gd +qRla+yf++AL+ar+a+++s  y a++++ ++    +  +  +++f +++P+ k+s+++aN+
  TEY20396.1 116 HTLLMQCAQAVATFDTRTVTDLLAKIRRHSSPHGDGTQRLAHYFANALEARVAGTGSAAYTAFSSRISA----AVFVRGYHTFIKACPFRKMSNILANK 210
                 679***************************************************999999999988886....7888999******************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +I + ++++  +HiiDf+i +G+QWp+L+q+L++Rp+gpp+lRiTg++ p++g   +e++  tg+rLa++++++gvpfe+++ +a+++e+++leeL+++
  TEY20396.1 211 TIRKLADSAASLHIIDFGILYGFQWPCLIQSLSERPGGPPKLRITGIDFPQPGfrPAERVADTGDRLARYCRRFGVPFEYKA-IAQKWESIKLEELEIE 308
                 ****************************************************9*****************************.7*************** PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 +gE l+Vn+ ++l +++de+v+++s+rd+vL+l+k+++P++++ +  +  +n++ F++rf e l  ys+lfd++ea++pre+ +r   E+e++g+++ n
  TEY20396.1 309 RGELLVVNCLYRLPNVPDETVAVDSPRDQVLRLIKRINPDMFIQAVVNGTYNTPFFVTRFREVLFQYSSLFDMYEATVPREDPNRLLFEEEVFGKDAIN 407
                 *************************************************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 ++aceg+er  r et+++W++r+ +aGF++++l+++++  ++  ++  + + ++++e+ +++++gWk+r L ++S+W+
  TEY20396.1 408 IIACEGTERLDRPETYKQWQARIVRAGFRQLRLDQQIVRHVRNKVKAEYHKDFSLDEDGKWMLQGWKGRVLHAFSCWK 485
                 **********************************************999888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MMNTLVQSEN DFHPNSNLNG VSEDSDAILK LIGIMLMEDE PCMLHDSSAL QATQKSLYDL  60
LNSNDNDNGS HNITTTKKNN RCREDDYRSN KQLAKNFSGE DDALEMFDKL VVVDLHTLLM  120
QCAQAVATFD TRTVTDLLAK IRRHSSPHGD GTQRLAHYFA NALEARVAGT GSAAYTAFSS  180
RISAAVFVRG YHTFIKACPF RKMSNILANK TIRKLADSAA SLHIIDFGIL YGFQWPCLIQ  240
SLSERPGGPP KLRITGIDFP QPGFRPAERV ADTGDRLARY CRRFGVPFEY KAIAQKWESI  300
KLEELEIERG ELLVVNCLYR LPNVPDETVA VDSPRDQVLR LIKRINPDMF IQAVVNGTYN  360
TPFFVTRFRE VLFQYSSLFD MYEATVPRED PNRLLFEEEV FGKDAINIIA CEGTERLDRP  420
ETYKQWQARI VRAGFRQLRL DQQIVRHVRN KVKAEYHKDF SLDEDGKWML QGWKGRVLHA  480
FSCWKPAQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46600.21e-165GRAS family protein