PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY19945.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 412aa MW: 43860.3 Da PI: 7.7276

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY19945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.9	2.1e-39	102	217	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLl qa+pai+++tgt++++a+++ ++s +ss+++ ++ TEY19945.1 102 VAKKPSKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLHQAEPAIIAATGTGTIPANFStLNVSMRSSGATFAAPpsksaplflgga 200 6899****************************************************************9997555555555533333344445555555 PP TCP 89 ................k 89 TEY19945.1 201 agmlgfhhqlaagthfG 217 55555544444444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MEFMEPHPKN QAPNNNSNSA DHRRHLHLHL QSQTEPGSAP PHGPLMGSIS LQQPRNLSHS 60 PSSASSAAPT TALVAIPNSN DNNTNSSSGG LATSNNNNNK LVAKKPSKDR HTKVDGRGRR 120 IRMPALCAAR VFQLTRELGH KSDGETIEWL LHQAEPAIIA ATGTGTIPAN FSTLNVSMRS 180 SGATFAAPPS KSAPLFLGGA AGMLGFHHQL AAGTHFGQEP DENYLKKRFR EDASGATSPK 240 PGRAGGHDQE PGQEHKPGSL QPSSYIQAPA MWAVAPAAAN VGNAFWMLPV TGSAAATAAG 300 QQEWQYKAPS ASAQRIGGFE FQGAGRFSPV QLGSMVLQQQ QQQPPVHQLG LGVTETNMGM 360 LASINAYNNN NNNNHNGIDL GMNLDHHHHQ HHQSQLQQSD SGEDDETAKD SQ

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MEFMEPHPKN QAPNNNSNSA DHRRHLHLHL QSQTEPGSAP PHGPLMGSIS LQQPRNLSHS  60
PSSASSAAPT TALVAIPNSN DNNTNSSSGG LATSNNNNNK LVAKKPSKDR HTKVDGRGRR  120
IRMPALCAAR VFQLTRELGH KSDGETIEWL LHQAEPAIIA ATGTGTIPAN FSTLNVSMRS  180
SGATFAAPPS KSAPLFLGGA AGMLGFHHQL AAGTHFGQEP DENYLKKRFR EDASGATSPK  240
PGRAGGHDQE PGQEHKPGSL QPSSYIQAPA MWAVAPAAAN VGNAFWMLPV TGSAAATAAG  300
QQEWQYKAPS ASAQRIGGFE FQGAGRFSPV QLGSMVLQQQ QQQPPVHQLG LGVTETNMGM  360
LASINAYNNN NNNNHNGIDL GMNLDHHHHQ HHQSQLQQSD SGEDDETAKD SQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	2e-51	TCP family protein