PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY19744.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | LBD | ||||||||
Protein Properties | Length: 153aa MW: 16654.7 Da PI: 8.4802 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 141.7 | 2.3e-44 | 11 | 109 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrrkC+++Cv+apyfp e+p+kfanvhk+FGasnv+kll++l +++r da+ssl+yeAear+rdPv+G+vg i+ lq+q+++l++el+++++ TEY19744.1 11 PCAACKFLRRKCSPGCVFAPYFPPEEPHKFANVHKIFGASNVSKLLHDLLPHQRGDAVSSLAYEAEARVRDPVHGCVGAISFLQKQVDRLQKELDAANA 109 7*********************************************************************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 153 aa Download sequence |
MASSTSSYNP PCAACKFLRR KCSPGCVFAP YFPPEEPHKF ANVHKIFGAS NVSKLLHDLL 60 PHQRGDAVSS LAYEAEARVR DPVHGCVGAI SFLQKQVDRL QKELDAANAD LIRFAAGGGG 120 GGGVFQTPNT YTFPYNYHSP WNTSYNPHGG RDI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63090.2 | 2e-70 | LBD family protein |