PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY19711.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 410aa MW: 47024.3 Da PI: 4.7683 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 61.7 | 8.6e-20 | 15 | 53 | 7 | 45 |
HHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 7 snrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 rqvt+ kRr+gilKKA+E+SvLCd+ + +i+fs++gk TEY19711.1 15 NSRQVTYGKRRAGILKKAQEISVLCDIPIVLIMFSPSGK 53 579**********************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 410 aa Download sequence |
MGRVKLKIQR LETLNSRQVT YGKRRAGILK KAQEISVLCD IPIVLIMFSP SGKPSIFCGQ 60 RRLMLKNKNG YVVIRLLFGF SNIDEMIAKY AQLTPKERAK RRLESLETLK RNFKKLDQDV 120 DIEEFLDTST PSIEEMQNRV MSLQLQLDEA RERVRWWSNP DTIEDVEHLN QMEDSLRESL 180 NRTQVTKEKI FKEPLIQFDC TSQVCGDFGR VYEQELPKPQ FPNAMPFPLA TTSDQDCTNQ 240 SWLPGGEAQH MMLPGEPQFL GSRDMECSRD ASFPTCSGYF ADVKEQELEN SRQMKTERLE 300 EGLTVDDYTY SAQLRLPLGD QYPYSSFGNL SFPDMMETGK DANFQLSSLD YQINGNFDLP 360 RSVCNNFPPS LVPAAGSCAI SMLNDHSYPQ VQQQVVERRF SGDFVLDDEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18750.1 | 7e-70 | M-type_MADS family protein |