PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY19683.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family RAV
Protein Properties Length: 308aa    MW: 34517.8 Da    PI: 10.0986
Description RAV family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY19683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.66.2e-134189155
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                s++kGV   + +grW A+I++      ++r++lg+f  + eAa+a++ a+++++g
  TEY19683.1 41 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEAEAARAYDTAAQRFRG 89
                689***9788.8*********3.....5**********99*************98 PP
2B31048.2e-33160260196
                 EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                 f+k+ tpsdv+k++rlv+pk++ae+h     g+++ +++ l led +g++W+++++y+++s++yvltkGW++Fvk+++L++gD+v F+++   +++l++
  TEY19683.1 160 FEKAVTPSDVGKLNRLVIPKQHAEKHfpfenGKSSSKGVLLNLEDGNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKELRAGDVVSFERSTGPDKQLYI 258
                 89****************************98888899**************************************************87667777777 PP

                 EE CS
          B3  95 kv 96 
                  +
  TEY19683.1 259 DW 260
                 65 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MDGSSADESS TTNSLSTTLQ ASPPPPPENG PEAESRKLPS SRFKGVVPQP NGRWGAQIYE  60
KHQRVWLGTF NEEAEAARAY DTAAQRFRGR DAVTNFTLTE DPAETAFLAS HSKAEIVDML  120
RKHTYIDELA QSRRRFSVGA GARTPQSQTL FAAKAREQLF EKAVTPSDVG KLNRLVIPKQ  180
HAEKHFPFEN GKSSSKGVLL NLEDGNGKVW RFRYSYWNSS QSYVLTKGWS RFVKEKELRA  240
GDVVSFERST GPDKQLYIDW KARGGSDRVQ VVRLFGVNIF ECGGGKRVRE MEIMGLDCAK  300
KQRIINVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.11e-135RAV family protein