PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY19236.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | YABBY | ||||||||
Protein Properties | Length: 237aa MW: 26356.4 Da PI: 9.255 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 143.8 | 1.8e-44 | 63 | 205 | 4 | 163 |
YABBY 4 fssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102 + +se+vCyv+C+fCnt+lav +P + l+ ++tv+CGhC++l ++ + +sq +h ++ + +++ +k +sas+s s TEY19236.1 63 QPASEHVCYVRCTFCNTVLAVGIPCKRLLDTLTVKCGHCSNLSFLSTKPQSQGHC-YDH-----------QTSLHYQAFCNEFKKGQSASSSS-----S 144 5689************************************986544444333222.222...........33445555544444444333333.....3 PP YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163 ++++ ++p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa + TEY19236.1 145 TSSEPSSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 205 46678899999************************************************76 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MLVSYEKLSN PRISSLVLSP PQALIFTLYI ASFSINMLIH FLFPFLFISH IIPSTFITMD 60 LAQPASEHVC YVRCTFCNTV LAVGIPCKRL LDTLTVKCGH CSNLSFLSTK PQSQGHCYDH 120 QTSLHYQAFC NEFKKGQSAS SSSSTSSEPS SPKAPFVVKP PEKKHRLPSA YNRFMKEEIQ 180 RIKAANPEIP HREAFSAAAK NWARYIPNTP QMNASTSTNK LNIGVISTAA FVYSNEG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69180.1 | 3e-63 | YABBY family protein |