PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY19138.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 429aa    MW: 47538.6 Da    PI: 4.7093
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY19138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS349.74.5e-107624283373
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 ++L++cA  +s++d e a + L rl++ +s +gdp++R+ +yf +AL +r++++ ++ +++ ++ ++     +e + ++k+f++++P+ kf+hltaNqa
  TEY19138.1  62 SALIDCAC-LSDSDPETAFKSLIRLQDSVSDHGDPLERVSHYFSQALYTRVYQQRDKSSSSASAATS----AEEFTLSYKAFNDACPYSKFAHLTANQA 155
                 78999*95.8999****************************************66666655555444....689999********************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 Ilea+e+++ +Hi+Df+i qG+QW+a+lqaLa+Rp+g+p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +++l+ +++rv+
  TEY19138.1 156 ILEATENATSIHIVDFGIVQGIQWAAFLQALATRPAGKPkRIRISGIPAPALGdsPAPSLLATGNRLQEFANLLDLEFEFDP-ILTPVHELTASSFRVD 253
                 ***********************************66665**********99998999************************.799************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 p+Ea++Vn++lql++lldes +  +   + L+l k+l P vv++ e e+++n+  Fl+rf +al+yy+a+f+s+e +l re+ eri +Er llgr+i  
  TEY19138.1 254 PDEAVVVNFMLQLYNLLDESDDGVE---AALNLAKGLDPCVVTLGEYEVSLNRVGFLTRFKNALKYYTAVFESVELNLTREAPERIELERLLLGRRIAG 349
                 *****************99888877...9********************************************************************** PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveee..sgslvlgWkdrpLvsvSaW 373
                 vv + +++ rer+e +e+Wr  +e aGF+p+++s++a +qa+ ll +++ s+ y++ ++   g l l W++ pL++vS+W
  TEY19138.1 350 VVGHGNRK-RERMEDKERWRVLMEGAGFRPLAFSHYAISQANILLWNYSsSRMYKLVDSspPGFLSLAWNEVPLLTVSSW 428
                 **998887.9***************************************9999**99772245566************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    
MESLMCPAAD STDTQSDWHP TPLYPSDPFP PPSDLIFSPW APPSSDPPQS HPSKDDQSPI  60
LSALIDCACL SDSDPETAFK SLIRLQDSVS DHGDPLERVS HYFSQALYTR VYQQRDKSSS  120
SASAATSAEE FTLSYKAFND ACPYSKFAHL TANQAILEAT ENATSIHIVD FGIVQGIQWA  180
AFLQALATRP AGKPKRIRIS GIPAPALGDS PAPSLLATGN RLQEFANLLD LEFEFDPILT  240
PVHELTASSF RVDPDEAVVV NFMLQLYNLL DESDDGVEAA LNLAKGLDPC VVTLGEYEVS  300
LNRVGFLTRF KNALKYYTAV FESVELNLTR EAPERIELER LLLGRRIAGV VGHGNRKRER  360
MEDKERWRVL MEGAGFRPLA FSHYAISQAN ILLWNYSSSR MYKLVDSSPP GFLSLAWNEV  420
PLLTVSSWH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-151GRAS family protein