PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY19023.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 371aa MW: 42215.9 Da PI: 4.3332

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY19023.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.8	1.5e-14	143	224	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+l+L++ ++ + +r++l++ W+ev++k+ ++er+ +qC+++++ l+k+ykk+k ++ s s+++yf++++ TEY19023.1 143 WTEHETLVLLDTWGDRFLKHGRKSLRGEEWQEVAEKVsLGSKIERTDTQCRNRLDTLKKKYKKEKLKFGD----SGSEWVYFKKID 224 ***********************************778899*****************999997....3557***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 371 aa Download sequence
MDDENDVPYR SNTYAANVQK LPVENASYPR DIGNSYGEDD DNTDDGEEDE KAVNDVDDDD 60 DNDDDDGGNG VQRISNNDYE YGDEDEDDNN DDGNGDQQRH PKKRKLKNLI SSYEFAPRLP 120 APPPATPSAP KPSYGGRNPL TDWTEHETLV LLDTWGDRFL KHGRKSLRGE EWQEVAEKVS 180 LGSKIERTDT QCRNRLDTLK KKYKKEKLKF GDSGSEWVYF KKIDVLLSSS QVQQGGLSCG 240 IDSGEYVFMN PKVYLNRSNG LDEMRDSPGN SSEGEEDESE GLPPKKTMGT GKIRSSAAPY 300 KMLADSFEKF SEIYERIEDS KRQQMVELEK MRMDLHRDLE MQKREILERG HAEIAKIRQE 360 EDEDNAENIS G

Sequence ? help Back to Top

Protein Sequence Length: 371 aa Download sequence

MDDENDVPYR SNTYAANVQK LPVENASYPR DIGNSYGEDD DNTDDGEEDE KAVNDVDDDD  60
DNDDDDGGNG VQRISNNDYE YGDEDEDDNN DDGNGDQQRH PKKRKLKNLI SSYEFAPRLP  120
APPPATPSAP KPSYGGRNPL TDWTEHETLV LLDTWGDRFL KHGRKSLRGE EWQEVAEKVS  180
LGSKIERTDT QCRNRLDTLK KKYKKEKLKF GDSGSEWVYF KKIDVLLSSS QVQQGGLSCG  240
IDSGEYVFMN PKVYLNRSNG LDEMRDSPGN SSEGEEDESE GLPPKKTMGT GKIRSSAAPY  300
KMLADSFEKF SEIYERIEDS KRQQMVELEK MRMDLHRDLE MQKREILERG HAEIAKIRQE  360
EDEDNAENIS G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	7e-61	Trihelix family protein