PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY18627.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 441aa    MW: 49852.6 Da    PI: 6.2373
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY18627.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS390.71.7e-119744401373
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++lL++cA+a+s+++  + ++l+ r s  +s +g p++Rl ay++++L ar    + ++y+a+++ e +   s   la++++ ++v P+lkfs+++aN
  TEY18627.1  74 LKQLLIACAQALSENKVDQFEKLVDRASRGVSITGPPIERLGAYMLQGLLARK---GAGIYRAFKCHEPD---SNAFLAYTRTMYQVWPYLKFSYMAAN 166
                 689*********************************************97765...55***********8...9999********************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrv 196
                  aI ea ++++r+Hi+Df+i+qG+QW++LlqaLa+Rp gpps+RiTgv++p s   +   l ++ge   ++ +++++p+ef++ v    +d++ e L+v
  TEY18627.1 167 GAIAEACKNSDRIHIVDFQIEQGTQWITLLQALAQRPTGPPSVRITGVDDPLSRltRGAGLAAVGETFVQISKKFNIPVEFHP-VPVLASDVTREVLNV 264
                 **************************************************99999999*************************.688899********* PP

        GRAS 197 kpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                 +pgEalaVn+ lqlh+++desv+++++rd++L++vkslsP+vv++veqe+++n++ Fl rf+e+l+yy a+f+sl+    res +ri+vE+++l+r+ v
  TEY18627.1 265 RPGEALAVNFPLQLHHTPDESVDVSNPRDRLLRMVKSLSPTVVTLVEQESNTNTAAFLPRFVETLDYYLAMFESLDIATERESMDRINVEQHWLARDMV 363
                 *************************************************************************************************** PP

        GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                 nv+aceg+er+erhe ++kWr+r+++aGF++ +ls +++  ++ llr ++ + y++ e++g+++l Wk+r+++s+SaW
  TEY18627.1 364 NVIACEGKERVERHELFGKWRSRFRMAGFEQCELSPYVNWVIRGLLRGYS-EHYSLVERDGAMLLAWKNRNVISASAW 440
                 **************************************************.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MESECYGSSS IPPGFDSPRC HFYGHYHDSV DGEINQHHIR RALQELERAL MAVDDDNAED  60
ITSHFLPQSS SNDLKQLLIA CAQALSENKV DQFEKLVDRA SRGVSITGPP IERLGAYMLQ  120
GLLARKGAGI YRAFKCHEPD SNAFLAYTRT MYQVWPYLKF SYMAANGAIA EACKNSDRIH  180
IVDFQIEQGT QWITLLQALA QRPTGPPSVR ITGVDDPLSR LTRGAGLAAV GETFVQISKK  240
FNIPVEFHPV PVLASDVTRE VLNVRPGEAL AVNFPLQLHH TPDESVDVSN PRDRLLRMVK  300
SLSPTVVTLV EQESNTNTAA FLPRFVETLD YYLAMFESLD IATERESMDR INVEQHWLAR  360
DMVNVIACEG KERVERHELF GKWRSRFRMA GFEQCELSPY VNWVIRGLLR GYSEHYSLVE  420
RDGAMLLAWK NRNVISASAW H
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-158GRAS family protein