PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY18394.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family GRAS
Protein Properties Length: 684aa    MW: 76041.3 Da    PI: 8.8012
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY18394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS413.22.4e-1262295921372
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l++l+++c+e + s++ ++++++Larl +lasp+g+p++Rl+ayfteA a r+ar +++++++ pp+e +  ++++   al+++++vsPi kf h+t+N
  TEY18394.1 229 LIDLVVACVEQIGSKNIAAVSHCLARLGKLASPRGSPLHRLIAYFTEAFALRVARLWPQVFHITPPRELE--HVDD--DALRVLNQVSPITKFVHFTCN 323
                 57899***************************************************************98..2333..5889***************** PP

        GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 + +l+a+eg++rvHiiDfdi+qGlQWp+L+q+LasR+++p ++RiTg+++    sk+el etg+rLa fAe++++pf+f++ v++rled++l++L+vk+
  TEY18394.1 324 EILLRALEGKDRVHIIDFDIKQGLQWPSLFQSLASRASPPSHVRITGISE----SKQELMETGDRLAGFAEAFNLPFQFHP-VVDRLEDVRLWMLHVKE 417
                 **************************************************....***************************.7**************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 +E+++Vn+v+qlh++l e  +l++    +L l++s +++vvv++eqea hn+++F +r++++l+yysa++ds++++l  es  r+k+E++ +grei+n+
  TEY18394.1 418 KETVVVNSVFQLHKMLYEGSALRE----FLGLIRSSNAQVVVMAEQEAAHNEATFDARLFNSLKYYSAVYDSIDSNLTLESPSRMKIEEM-FGREIRNI 511
                 ****************98888888....**************************************************************.******** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrve.....eesgslvlgWkdrpLvsvSa 372
                 + ceg++r+erhe+++kW++ +e+ GF+ v +se++  q +++l++++ ++ yrve     ++s sl+l W+d+pL++vSa
  TEY18394.1 512 IGCEGRQRFERHEKFGKWQQLMEQGGFRCVGVSERELLQGQMMLKMYSsNHNYRVEvqqgsSSSSSLTLSWSDQPLYAVSA 592
                 ************************************************8889****666655589999************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 684 aa     Download sequence    
MLAGCSSTLL SPRHRLRSGA SAQFQACHIP AMSTQRLDLP CSFGRKEASR RQLVRQVGIS  60
VDKGIESKSS LRQNIKLPPV AAERRGEFWG RSKKRYAATD EGSNYMSRVK KRKSGNGKSE  120
EESGEERDER GFFDLPPLPP LSNVPWFDSV VTEVTDSGMS KDVHPHREVS ASGSSSTSSG  180
SHSLALGLGS SNPTVEREAV GNGSSSRNPS EVVAGHNGSS QREHECVELI DLVVACVEQI  240
GSKNIAAVSH CLARLGKLAS PRGSPLHRLI AYFTEAFALR VARLWPQVFH ITPPRELEHV  300
DDDALRVLNQ VSPITKFVHF TCNEILLRAL EGKDRVHIID FDIKQGLQWP SLFQSLASRA  360
SPPSHVRITG ISESKQELME TGDRLAGFAE AFNLPFQFHP VVDRLEDVRL WMLHVKEKET  420
VVVNSVFQLH KMLYEGSALR EFLGLIRSSN AQVVVMAEQE AAHNEATFDA RLFNSLKYYS  480
AVYDSIDSNL TLESPSRMKI EEMFGREIRN IIGCEGRQRF ERHEKFGKWQ QLMEQGGFRC  540
VGVSERELLQ GQMMLKMYSS NHNYRVEVQQ GSSSSSSLTL SWSDQPLYAV SASPKSRITP  600
PLLILLSKIH PSSSTGTPFT IEITLTFLKI PSLSNSLLST FLSNSLAAPS GSESPTRIGF  660
LFYPLNMIST TFFTSSFSCR RGFK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193113KKRYAATDEGSNYMSRVKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63100.11e-167GRAS family protein