PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY18277.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

DBB

Protein Properties

Length: 298aa MW: 32939.7 Da PI: 6.9907

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY18277.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.1	1.2e-05	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl TEY18277.1 4 QCNVCEAAEASVLCCADEAALCWPCDQKVHAAnklagkHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	30.7	6.3e-10	52	94	1	37
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 s+++kC+ ++e +fC +++ llC++C +++H H TEY18277.1 52 SQMPKCDICQETVGYFFCLEDRALLCRKCDVAIHTAnslvsgH 94 689*******9*******************545555566 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MKIQCNVCEA AEASVLCCAD EAALCWPCDQ KVHAANKLAG KHQRVPLSTA SSQMPKCDIC 60 QETVGYFFCL EDRALLCRKC DVAIHTANSL VSGHQRFLLT GVKVGLEATE GRAEPFLGKT 120 NMADKILEPE SHSLPKKPPR HHQLLNMVKA CLFKLADVVI FQSRPSPEVP QQEVFHSGSL 180 MNFSDMVISL RATISWIMTH LRYADSGKLG SSDGSQILLA ADGELECDDC MGHVPETYWA 240 VPQITSPPTA SGLYWPKSFQ NQPDSAVFVP DISSPPLQNL RNHQDHSHAT NSKRMRHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	3e-76	DBB family protein