PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY17825.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | ARF | ||||||||
Protein Properties | Length: 698aa MW: 78497.5 Da PI: 6.7234 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 73.5 | 2.6e-23 | 144 | 245 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvlt sd++++g +++ +++a+e+ + ++ ++l+ +d++g++W++k+i+r++++r++lt+GW+ Fv ++++ +gD++vF + +++ TEY17825.1 144 FCKVLTASDTSTHGGFSVLRRHANEClpplemslQ--IPT-QELIAKDLHGNEWQFKHIFRGQPRRHLLTTGWSTFVTSKRIVAGDSFVFL--RGENGD 237 99****************************98533..333.48************************************************..348899 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+v+v+r+ TEY17825.1 238 LRVGVRRH 245 9****997 PP | |||||||
2 | Auxin_resp | 103.6 | 2.4e-34 | 270 | 349 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t+++F v+Y+Pr+ s+F+v ++k+++++++ + vGmRfkm+fe++ds+err+sGt+vgv+d++p +W++SkWr Lk TEY17825.1 270 ASHAVMTQTIFVVYYKPRT--SQFIVGLNKYLESINHDFGVGMRFKMRFEGDDSPERRFSGTIVGVEDMSP-HWNDSKWRTLK 349 689***************6..9*************************************************.********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 698 aa Download sequence |
MESGEVRVLV ELWRIGARFL SGSSMFHQVK PRVSVKDSLY EELWRGCAGP LVDVPKAGER 60 VYYFPQGHME QLEASTNQEL NQRIPMFNLP PKILCKVFNV QLLAEKDTDE VYAQITLMPE 120 SDQSEPRSPD SPIDETPRPA VHSFCKVLTA SDTSTHGGFS VLRRHANECL PPLEMSLQIP 180 TQELIAKDLH GNEWQFKHIF RGQPRRHLLT TGWSTFVTSK RIVAGDSFVF LRGENGDLRV 240 GVRRHARQQI SIPSSVISSQ SMHLGVLATA SHAVMTQTIF VVYYKPRTSQ FIVGLNKYLE 300 SINHDFGVGM RFKMRFEGDD SPERRFSGTI VGVEDMSPHW NDSKWRTLKV QWDEPASIPR 360 PERVSPWEID PFVASIPPTL VQPPTIKNKR FRPHIEIAVP ETITSIASPT WNLGHDAHQI 420 NHSFEGQRSS YINNSHTKQT DASTTPMKHS NDGVPTTRTD GGWHPPLHVH AEETEESKSA 480 WSVISNHSAP NSRSQFNTLG TACTDVRMPD AQPSCRLFGF NLKSPSIAPS RLADIPNDSG 540 EVHIPSALSS ADSEQKSSVS KEFKDLRQDQ LQVPTKEIQS RQSNSSRSRT KVQMQGVAVG 600 RAVDLTTLKG YDNLITELEE MFEIKGELQS RNKWEIVFTD DEGDMMLVGD DPWPEFCNMV 660 RRIFICSSQD VKKMKGNKLP VSATETEAAG FVFENIGD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G23980.2 | 0.0 | ARF family protein |