PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY17445.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family C3H
Protein Properties Length: 464aa    MW: 50580 Da    PI: 7.0907
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY17445.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH36.21e-11326125
                --S---SGGGGTS--TTTTT-SS-S CS
     zf-CCCH  1 yktelCrffartGtCkyGdrCkFaH 25
                +k elCr+f+r G C+yG rCkF H
  TEY17445.1  3 PKKELCRYFQR-GSCQYGTRCKFLH 26
                699********.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MPPKKELCRY FQRGSCQYGT RCKFLHTTPQ QSQSNRFGFG AQTSSPNPQP NPFGFDTQTS  60
RTPNQQPNPQ PNPFGFGVQS SAHSRGGDGF VSKPNQVKVL SVVIQAVDCF VVYGVDILSC  120
CHLLYYRIDY VLLTDTLKND LISKWLIFLI SFCQPFDNKW SRFSNVNNSS APASRPANNQ  180
PSAANHTCTT DIESCKRVIL EDLENEKPLW KLTCYGHSRN GPCDIVGDIS YDELRALAYD  240
DAKHGKDIAS IVERERNLLN SKLLEFQNLA QKPYPVSSAP TPSSQNMFGG GSIIAPVANN  300
GFSSQVSSFS QLSGSSNTRS AAAPNFSFGQ PNAFQNNTQP SSFQTNNSPF NTSGAFGIQP  360
QHSTTQSFSP FGTSSNNGAL SAPQNPFSTP ASLPQTGNGP GKQLNFFTNE PITASSAIGL  420
TNTSIQLINN IPTENANVDD GVWTKAQWNV GEIPEEEPPT IYIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75340.29e-46C3H family protein