PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY17430.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

bHLH

Protein Properties

Length: 492aa MW: 54399.4 Da PI: 6.0283

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY17430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.4	8e-16	276	322	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P + K +Ka++L +A+eY+ksLq TEY17430.1 276 VHNLSERRRRDRINEKMRALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 322 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MNHCVPDFHE MEEADLIPTP SSFSTLKKTT TGEEDIMELL WQNGQVVVQS QNQRPPNRSG 60 SRSGSGEVVI PLEREIRSSA EEQQHLFIQE DEMASWLLDD SSFDRDFYAD LLYSAPPPLP 120 EIRPPPIPPP VARPDNPPRV QNFVHFSRLP IRPRPPARES STVVESNETP APAPESRVSH 180 SGPPDSATVR TGGTSAAAGT CDLTAASSPG SSPTSFSGDT HQPQHKLAAA PEDRKRKVRE 240 ADDNECQSED IEFEAAEGKK QGCGSASTKR SRAAEVHNLS ERRRRDRINE KMRALQELIP 300 RCNKSDKASM LDEAIEYLKS LQLQVQFSNM LSSKFIHDHL LISLLKRLLD FVQMMSMSCG 360 MVPMMYPVGV QQYMPAAMGL GMGMDMGMSR PMVPYPPMMA GSAMPNPAAA AAHMGPRFPL 420 PPFHMQPVPV PDPSALQPTN RADHVSNSTA IPQNQNQNQN QPRFQNFPDP YQQYLGFHPT 480 QLPIPQASLI ST

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MNHCVPDFHE MEEADLIPTP SSFSTLKKTT TGEEDIMELL WQNGQVVVQS QNQRPPNRSG  60
SRSGSGEVVI PLEREIRSSA EEQQHLFIQE DEMASWLLDD SSFDRDFYAD LLYSAPPPLP  120
EIRPPPIPPP VARPDNPPRV QNFVHFSRLP IRPRPPARES STVVESNETP APAPESRVSH  180
SGPPDSATVR TGGTSAAAGT CDLTAASSPG SSPTSFSGDT HQPQHKLAAA PEDRKRKVRE  240
ADDNECQSED IEFEAAEGKK QGCGSASTKR SRAAEVHNLS ERRRRDRINE KMRALQELIP  300
RCNKSDKASM LDEAIEYLKS LQLQVQFSNM LSSKFIHDHL LISLLKRLLD FVQMMSMSCG  360
MVPMMYPVGV QQYMPAAMGL GMGMDMGMSR PMVPYPPMMA GSAMPNPAAA AAHMGPRFPL  420
PPFHMQPVPV PDPSALQPTN RADHVSNSTA IPQNQNQNQN QPRFQNFPDP YQQYLGFHPT  480
QLPIPQASLI ST

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	281	286	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20180.2	7e-46	bHLH family protein