PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY17419.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 292aa    MW: 30374.1 Da    PI: 6.7206
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY17419.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF69.23.7e-224793248
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                +ien++n qvtfskRr+g++KKA+ELS+LC+ae a++++s+ +k + 
  TEY17419.1 47 KIENDTNLQVTFSKRRAGVFKKASELSTLCGAECALVVYSPGDKPHS 93
                79**************************************9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MNASGDGNNN YPMHPQGGDE DGDDYMLHHE NEQRRKGKGR QKIEMAKIEN DTNLQVTFSK  60
RRAGVFKKAS ELSTLCGAEC ALVVYSPGDK PHSFGHPSVE VVTTRPPNRS ANREVVAVET  120
QVDQAKQRRK ELDGLPPVLQ LESLNYQQLD QLRNSVLMYK QGVQAQFSGG AGVYGYGGGG  180
AAAGYGQNVQ YPPMGYGTAG YNYGAPSAGV VPYNAGIAGA QGGANYGGFP GGVQGEANYG  240
GYPGSSDGNV GGAQGGVNYG GFPGGSGGNV DGGQGGANYG GFPGNYHHHP GY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.13e-30M-type_MADS family protein