PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY17354.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 253aa MW: 27607.8 Da PI: 7.4369 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 70.7 | 1.3e-22 | 32 | 79 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 +ien++n qvtfskRr+g++KKA+ELS+LC+ae a+++fs+ +k + + TEY17354.1 32 KIENDTNLQVTFSKRRAGVFKKASELSILCGAECALVVFSPGNKPHSF 79 79***************************************9987766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MHPEDGDDHM MVHPENEQRR KGKGRQKIEM AKIENDTNLQ VTFSKRRAGV FKKASELSIL 60 CGAECALVVF SPGNKPHSFG HPSVEAVTNR FLQANGGGGG APPPVNAAER MIMVHSEAAT 120 AQRNQELVAL ETRVEQAKQR RRELDGMVPP LQMENLNYEH LEQLRNSVLM YKHGVGAKFS 180 GATSSSVGPG AYRYGQPELG YTVQYPAMGD NNGMAGYNYG DPSAVVPYDP ATGTSNANYG 240 GFPGNYHHHH PGY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60440.1 | 1e-31 | M-type_MADS family protein |