PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY17352.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 262aa MW: 27848.5 Da PI: 8.7301 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 58.4 | 9e-19 | 33 | 80 | 2 | 49 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 +ien++n qvtfskRr+g++KKA+EL + C+ae a++++s+ k + + TEY17352.1 33 KIENDTNLQVTFSKRRTGVFKKASELGIQCGAEYAIVVYSPGEKPHSF 80 79**************************************98876665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MNASGDGNNN YPMHPENEQR RKSKGRQKIE MAKIENDTNL QVTFSKRRTG VFKKASELGI 60 QCGAEYAIVV YSPGEKPHSF GNPSVEAVTT RFLQANGGGG GAPPARGTIA DRRAKQRRRE 120 LDGMPPVLQM ENLNYEQLEQ LRNSVLMYKQ GVQAKFSGGA GVYGYGGNAP VYGQNEQYPP 180 MGYNYGDPYN AAAGSFNANV GGAHAGANYE GFPGSSGDIN SAQGGANYGG FPGSSDASID 240 GAQGGANYGG FPGNYYHHHP GY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 120 | RRAKQRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60440.1 | 1e-30 | M-type_MADS family protein |