PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY16911.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRAS

Protein Properties

Length: 447aa MW: 50504.2 Da PI: 4.8509

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY16911.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	91	1.9e-28	274	426	140	301
GRAS 140 pslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkv 238 +l+i +v s ++++eetg+ L++fAe++++pf +l+ ++ ++e ++L+++ gE++aV + + l l d++ + +L+ +k+l+P v TEY16911.1 274 KQLKISAVCS----ARDSVEETGNLLSSFAESMNLPFVLMFLHLET-WEFEKDRLQLEAGETVAVFMEFCLIPLSDRPEGIGA----LLRGIKDLKPLV 363 689*****....99*********************75555.56789******************988877777....******** PP GRAS 239 vvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvace 301 ++vv+ e+d n+ +F+ rf eal + al dslea l re++ r+ vE+ ++++ i+n ++ e TEY16911.1 364 LIVVDVETDINALDFAPRFKEALLLMCALVDSLEACLERENQYRKIVEKIYFQEVICNGIMRE 426 ********************************************************99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MFDSRNVDGN SIFVSVYVPI FSRNLRRAVE KRIPCLLALF QILLYLDNDS HSAGSSGKYM 60 PQEVNMELPL HDIEAKSDVP REPFALLNRY GNKLKRLNRL QSEERNSLSS KSQLLSAVTI 120 MNMAEIVLSQ STHEKRGDVY KLVESDCAEH LKRVLWLLDA SEKLAKRHYD EAEELLVLAL 180 SGSLEGHPIE TVLTLSGKYL RERIYVERGR IDLEREVEHV DIEQAVMDLK VNVVEIEQKL 240 PSSQISNFTG VQTILDSVAA AERIHFIDFG RGVKQLKISA VCSARDSVEE TGNLLSSFAE 300 SMNLPFVLMF LHLETWEFEK DRLQLEAGET VAVFMEFCLI PLSDRPEGIG ALLRGIKDLK 360 PLVLIVVDVE TDINALDFAP RFKEALLLMC ALVDSLEACL ERENQYRKIV EKIYFQEVIC 420 NGIMREDGGL SDVLRLICGG NTLQSSV

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MFDSRNVDGN SIFVSVYVPI FSRNLRRAVE KRIPCLLALF QILLYLDNDS HSAGSSGKYM  60
PQEVNMELPL HDIEAKSDVP REPFALLNRY GNKLKRLNRL QSEERNSLSS KSQLLSAVTI  120
MNMAEIVLSQ STHEKRGDVY KLVESDCAEH LKRVLWLLDA SEKLAKRHYD EAEELLVLAL  180
SGSLEGHPIE TVLTLSGKYL RERIYVERGR IDLEREVEHV DIEQAVMDLK VNVVEIEQKL  240
PSSQISNFTG VQTILDSVAA AERIHFIDFG RGVKQLKISA VCSARDSVEE TGNLLSSFAE  300
SMNLPFVLMF LHLETWEFEK DRLQLEAGET VAVFMEFCLI PLSDRPEGIG ALLRGIKDLK  360
PLVLIVVDVE TDINALDFAP RFKEALLLMC ALVDSLEACL ERENQYRKIV EKIYFQEVIC  420
NGIMREDGGL SDVLRLICGG NTLQSSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08250.1	1e-15	GRAS family protein