PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY16767.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

ARF

Protein Properties

Length: 658aa MW: 74052.8 Da PI: 6.7347

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY16767.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.6	2.3e-23	144	245	1	99
EEEE-..-HHHHTT-EE--HHH.HTT........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvlt sd++++g +++ +++a+e+ + ++ ++l+ +d++g++W++k+i+r++++r++lt+GW+ Fv ++++ +gD++vF + +++ TEY16767.1 144 FCKVLTASDTSTHGGFSVLRRHANEClpplemslQ--IPT-QELIAKDLHGNEWQFKHIFRGQPRRHLLTTGWSTFVTSKRIVAGDSFVFL--RGENGD 237 99**************************98533..333.48********************************************..348899 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+v+v+r+ TEY16767.1 238 LRVGVRRH 245 9**997 PP
2	Auxin_resp	103	3.7e-34	270	349	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha+ t+++F v+Y+Pr+ s+F+v ++k+++++++ + vGmRfkm+fe++ds+err+sGt+vgv+d++p +W++SkWr Lk TEY16767.1 270 ASHAVMTQTIFVVYYKPRT--SQFIVGLNKYLESINHDFGVGMRFKMRFEGDDSPERRFSGTIVGVEDMSP-NWNDSKWRTLK 349 689*************6..9*********************************************.******996 PP

Sequence ? help Back to Top
Protein Sequence Length: 658 aa Download sequence
MERGEVRVLV ELWRIGARFL SGSSMFHQVK PRVSVKDSLY EELWRGCAGP LVDVPKAGER 60 VYYFPQGHME QLEASTNQEL NQRIPMFNLP PKILCKVFNV QLLAEKDTDE VYAQITLMPE 120 SDQSEPRSPD SPIDETPRPA VHSFCKVLTA SDTSTHGGFS VLRRHANECL PPLEMSLQIP 180 TQELIAKDLH GNEWQFKHIF RGQPRRHLLT TGWSTFVTSK RIVAGDSFVF LRGENGDLRV 240 GVRRHARQQI SIPSSVISSQ SMHLGVLATA SHAVMTQTIF VVYYKPRTSQ FIVGLNKYLE 300 SINHDFGVGM RFKMRFEGDD SPERRFSGTI VGVEDMSPNW NDSKWRTLKV QWDEPASIPR 360 PERVSPWEID PFVASIPPTL VQPPTIKNKR FRPHIEIAVP DASTTPMKHS NDGVPTTRTD 420 GGWHPPLHVH AEETEESKSA WSVISNHSAP NSRSQFNTLG TACTDVRMPD AQPSCRLFGF 480 NLKSPSIAPS RLADIPNDSG EVHIPSALSS ADSEQKSSVS KEFKDLRQDQ LQVPTKEIQS 540 RQSNSSRSRT KVQMQGVAVG RAVDLTTLKG YDNLITELEE MFEIKGELQS RNKWEIVFTD 600 DEGDMMLVGD DPWPEFCNMV RRIFICSSQD VKKMKGNKLP VSATETEAAG FVFENIGD

Sequence ? help Back to Top

Protein Sequence Length: 658 aa Download sequence

MERGEVRVLV ELWRIGARFL SGSSMFHQVK PRVSVKDSLY EELWRGCAGP LVDVPKAGER  60
VYYFPQGHME QLEASTNQEL NQRIPMFNLP PKILCKVFNV QLLAEKDTDE VYAQITLMPE  120
SDQSEPRSPD SPIDETPRPA VHSFCKVLTA SDTSTHGGFS VLRRHANECL PPLEMSLQIP  180
TQELIAKDLH GNEWQFKHIF RGQPRRHLLT TGWSTFVTSK RIVAGDSFVF LRGENGDLRV  240
GVRRHARQQI SIPSSVISSQ SMHLGVLATA SHAVMTQTIF VVYYKPRTSQ FIVGLNKYLE  300
SINHDFGVGM RFKMRFEGDD SPERRFSGTI VGVEDMSPNW NDSKWRTLKV QWDEPASIPR  360
PERVSPWEID PFVASIPPTL VQPPTIKNKR FRPHIEIAVP DASTTPMKHS NDGVPTTRTD  420
GGWHPPLHVH AEETEESKSA WSVISNHSAP NSRSQFNTLG TACTDVRMPD AQPSCRLFGF  480
NLKSPSIAPS RLADIPNDSG EVHIPSALSS ADSEQKSSVS KEFKDLRQDQ LQVPTKEIQS  540
RQSNSSRSRT KVQMQGVAVG RAVDLTTLKG YDNLITELEE MFEIKGELQS RNKWEIVFTD  600
DEGDMMLVGD DPWPEFCNMV RRIFICSSQD VKKMKGNKLP VSATETEAAG FVFENIGD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G23980.1	0.0	ARF family protein