PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY15742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 244aa MW: 27274.5 Da PI: 10.0616 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 81.3 | 6.2e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+ rqvtfskRr g+ KKA+E+S LCda+va+i+fs++gkl+ y+s TEY15742.1 9 KRIENKISRQVTFSKRRSGLWKKANEISLLCDADVALIVFSTSGKLFHYCS 59 79***********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 244 aa Download sequence |
MGRGRVEMKR IENKISRQVT FSKRRSGLWK KANEISLLCD ADVALIVFST SGKLFHYCSH 60 PSLDVHLRRQ APPYHNLRSS SSLTKPIQLP ATAPCSYLLL QHGFSFTYGQ LPVLAAYTPP 120 PHCPSPSSAK IVLEWTATSK GRQFDRIFGV WIDGAEGLRS CTAEPFAAGI IWTVKKEVTR 180 YSSLLSTNQT LAVYLGNLVD STYIGVYHVN ILREFGRLAP RPSKTWPSSA ISAQNYEVQI 240 LYIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60910.1 | 2e-28 | MIKC_MADS family protein |