PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TEY15129.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 182aa MW: 19737.7 Da PI: 7.4174 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 124.5 | 5.3e-39 | 11 | 111 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+lrrkC+k+Cv+apyf ++q +++fa+vh++FGasn +kll ++p++ r da+ +l+yeA ar+rdPvyG+v++i++lqqq+ +l+aela+++ TEY15129.1 11 PCGACKFLRRKCVKGCVFAPYFDSDQgAAHFAAVHRVFGASNASKLLLRIPPHCRLDAVVTLCYEALARVRDPVYGCVAHIFTLQQQVVNLQAELAHTQ 109 7***********************9989********************************************************************998 PP DUF260 99 ee 100 ++ TEY15129.1 110 AR 111 76 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 182 aa Download sequence |
MSCVVEGGGG PCGACKFLRR KCVKGCVFAP YFDSDQGAAH FAAVHRVFGA SNASKLLLRI 60 PPHCRLDAVV TLCYEALARV RDPVYGCVAH IFTLQQQVVN LQAELAHTQA RISTLQHTPP 120 SLPLPVLNSS MVETSPSSLG MVSFCSSSVD QEVEDDGDLQ SLAREYVSRY FPGVRFMPPT 180 PH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G45410.1 | 9e-66 | LBD family protein |