PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY15078.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 584aa MW: 65171.3 Da PI: 6.3843

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY15078.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	70	116	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++v++ G + W+ Ia+ ++ gR +kqc++rw ++l TEY15078.1 70 KGPWSKEEDAILIELVERSGEKKWSEIAEQLP-GRMGKQCRERWCNHL 116 79****************************.***********96 PP
2	Myb_DNA-binding	51.7	2e-16	124	164	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT eE+ l++a++++G++ W+ a+ ++ gRt++++k++w+ TEY15078.1 124 PWTDEEERTLINAHAEYGNK-WSILAKLLP-GRTENSVKNHWN 164 8*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MAEEEGARND DDNHSRKLSG PTRRSSKANW TEEEFDFEKR IWFVAGCLPG RTDVQCLHRW 60 QKVINPGLVK GPWSKEEDAI LIELVERSGE KKWSEIAEQL PGRMGKQCRE RWCNHLKPEI 120 IKAPWTDEEE RTLINAHAEY GNKWSILAKL LPGRTENSVK NHWNCSLKKR LCCNPAFGSI 180 ANHPRLYVPP LQANSKRVAR DSTEANQTSS NTNLDSGSNI KLSSMDLFHG NHSNLSFASG 240 NAEPSTSSKT VIIDDMSKAL NHGTRKTEIP GFTSLCEDHP CHMPSLVCDN GDRIRPRGDS 300 GDNPASSSEG SYTGLCYEPI QRADLDIFLS TGRFPSTESY IRQQPRPRRD EKELPVDAYS 360 RARAILRSAA MSYHNVPSII RKRAIQLLYG CVPALEPLNL WGFETEFGSN NLSTVFSNSS 420 CISLSLLSLC IISSESKMPQ GTLEVVLIDA SGLEKTDFLS STDVYAIIKC QDQEKTSKVA 480 SVEGSSPTWN ETFMFSISWD VKELKIRIMD KDNLSADDFV GEVTIPLGPV FESERVPTTM 540 YNVVKDGTLC GGLNVSLKFN QQTTRSRGFP NEDLGGWKSS SAMD

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MAEEEGARND DDNHSRKLSG PTRRSSKANW TEEEFDFEKR IWFVAGCLPG RTDVQCLHRW  60
QKVINPGLVK GPWSKEEDAI LIELVERSGE KKWSEIAEQL PGRMGKQCRE RWCNHLKPEI  120
IKAPWTDEEE RTLINAHAEY GNKWSILAKL LPGRTENSVK NHWNCSLKKR LCCNPAFGSI  180
ANHPRLYVPP LQANSKRVAR DSTEANQTSS NTNLDSGSNI KLSSMDLFHG NHSNLSFASG  240
NAEPSTSSKT VIIDDMSKAL NHGTRKTEIP GFTSLCEDHP CHMPSLVCDN GDRIRPRGDS  300
GDNPASSSEG SYTGLCYEPI QRADLDIFLS TGRFPSTESY IRQQPRPRRD EKELPVDAYS  360
RARAILRSAA MSYHNVPSII RKRAIQLLYG CVPALEPLNL WGFETEFGSN NLSTVFSNSS  420
CISLSLLSLC IISSESKMPQ GTLEVVLIDA SGLEKTDFLS STDVYAIIKC QDQEKTSKVA  480
SVEGSSPTWN ETFMFSISWD VKELKIRIMD KDNLSADDFV GEVTIPLGPV FESERVPTTM  540
YNVVKDGTLC GGLNVSLKFN QQTTRSRGFP NEDLGGWKSS SAMD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	3e-61	MYB family protein