PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY14351.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

Trihelix

Protein Properties

Length: 372aa MW: 42345 Da PI: 4.3185

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY14351.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	45.8	1.5e-14	144	225	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+l+L++ ++ + +r++l++ W+ev++k+ ++er+ +qC+++++ l+k+ykk+k ++ s s+++yf++++ TEY14351.1 144 WTEHETLVLLDTWGDRFLKHGRKSLRGEEWQEVAEKVsLGSKIERTDTQCRNRLDTLKKKYKKEKLKFGD----SGSEWVYFKKID 225 ***********************************778899*****************999997....3557***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MDDENDVPYR SNTYAANVQK LPVENASYPR DIGNSYGEDD DNTDDGEEDE EKAVNDVDDD 60 DDNDDDDGGN GVQRISNNDY EYGDEDEDDN NDDGNGDQQR HPKKRKLKNL ISSYEFAPRL 120 PAPPPATPSA PKPSYGGRNP LTDWTEHETL VLLDTWGDRF LKHGRKSLRG EEWQEVAEKV 180 SLGSKIERTD TQCRNRLDTL KKKYKKEKLK FGDSGSEWVY FKKIDVLLSS SQVQQGGLSC 240 GIDSGEYVFM NPKVYLNRSN GLDEMRDSPG NSSEGEEDES EGLPPKKTMG TGKIRSSAAP 300 YKMLADSFEK FSEIYERIED SKRQQMVELE KMRMDLHRDL EMQKREILER GHAEIAKIRQ 360 EEDEDNAENI SG

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MDDENDVPYR SNTYAANVQK LPVENASYPR DIGNSYGEDD DNTDDGEEDE EKAVNDVDDD  60
DDNDDDDGGN GVQRISNNDY EYGDEDEDDN NDDGNGDQQR HPKKRKLKNL ISSYEFAPRL  120
PAPPPATPSA PKPSYGGRNP LTDWTEHETL VLLDTWGDRF LKHGRKSLRG EEWQEVAEKV  180
SLGSKIERTD TQCRNRLDTL KKKYKKEKLK FGDSGSEWVY FKKIDVLLSS SQVQQGGLSC  240
GIDSGEYVFM NPKVYLNRSN GLDEMRDSPG NSSEGEEDES EGLPPKKTMG TGKIRSSAAP  300
YKMLADSFEK FSEIYERIED SKRQQMVELE KMRMDLHRDL EMQKREILER GHAEIAKIRQ  360
EEDEDNAENI SG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	8e-61	Trihelix family protein