PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY13835.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

TCP

Protein Properties

Length: 268aa MW: 28856.3 Da PI: 10.1458

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY13835.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.3	2.8e-38	26	216	2	112
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg.......... 88 ++kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ +++s++ss+s + TEY13835.1 26 PVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStvSPSSRNSSSS---LSaaldhkplah 121 789*************************************************************99999777553333333333...112345556778 PP TCP 89 .......................................................................kaaksaakskksqksaasalnlak 112 ++++s+++++++q+++++ l + + TEY13835.1 122 slltptpfilgkrlrpddddhhqhlskddvtsvsasvgptitaggfwalpartdfgqvwsfaapppemvvtASNNSHHQQHQQQQQHSASLRFLQ 216 88888888888888888888888888888888888888888888888888888888888888888888886555555555555555555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MSTSAADASI VDPSQRHLQL QTVPAPVKKP PAKDRHSKVD GRGRRIRMPI ICAARVFQLT 60 RELGHKSDGQ TIEWLLRQAE PSIIAATGTG TTPASFSTVS PSSRNSSSSL SAALDHKPLA 120 HSLLTPTPFI LGKRLRPDDD DHHQHLSKDD VTSVSASVGP TITAGGFWAL PARTDFGQVW 180 SFAAPPPEMV VTASNNSHHQ QHQQQQQHSA SLRFLQQHQP LGIGEASAAR VGNYLPIAQV 240 QGHHLNLLAS LSGPPPQSSE QRRDADAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	3e-60	TCP family protein