PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY13188.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | ARF | ||||||||
Protein Properties | Length: 841aa MW: 93776.1 Da PI: 6.2263 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 71.7 | 9e-23 | 144 | 245 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k+lt sd++++g +++ +++a+e+ + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F + +++el+ TEY13188.1 144 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGQEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENGELR 239 99*****************************7333.34459************************************************..44999999 PP EEEE-S CS B3 94 vkvfrk 99 +v+r+ TEY13188.1 240 AGVRRA 245 999985 PP | |||||||
2 | Auxin_resp | 121.9 | 4.7e-40 | 270 | 352 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg +d+dp rW++SkWr+Lk TEY13188.1 270 AWHAIQTNTMFTVYYKPRTSPAEFIVPYNQYMESIKQNYSIGMRFKMRFEGEEAPEQRFTGTIVGSEDADPNRWKDSKWRCLK 352 89*******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 841 aa Download sequence |
MDSPEVLIKG CNDVGGADPA PGNMNSDAGR AVDAERALYT ELWKACAGPL VTVPRENELV 60 FYFPQGHIEQ VEASTNQSSD QQMPVYNLPP KILCRVVNVL LKAEADTDEV FAQITLMPEA 120 NQDENAERKE PPPSSPPHLR VYSFCKTLTA SDTSTHGGFS VLRRHADECL PPLDMSRQPP 180 TQELVAKDLH GQEWRFRHIF RGQPRRHLLQ SGWSVFVSSK RLVAGDAFIF LRGENGELRA 240 GVRRAMRQQG NVPSSVISSH SMHLGVLATA WHAIQTNTMF TVYYKPRTSP AEFIVPYNQY 300 MESIKQNYSI GMRFKMRFEG EEAPEQRFTG TIVGSEDADP NRWKDSKWRC LKVRWDETSA 360 IVRPERVSPW KIEHTLSPPV LNPVPVPRPK RPRSSVLPSS SETSVLTREG PTKMTADPAP 420 ANHGFPRVLQ GQESSTLRSP FSESIELDSP EKSYLWKPTL EEEKIDVSAS RRYGADNWSP 480 LGRPESSFTD LLSGFGSKTN AHRDFSMPIG NQSNPKRQTQ ECDAKFSLMG NIWSIMPSGL 540 SFNPMDSSTK NHVQGTDTSF LARGDSRHGA FRDFSMINDL RGDNQGANWS MPPPVSTYLQ 600 MRTSQPRELM PKPVFAEKQD TMKQKEGNCK LFGIPLISKS APSEPEISNR NVLNSPGFTP 660 NSGHSHQFPA FELDQKSDQS KGLKAGDHGV AAGEQENQFP SFPPSGTERE TKGHSGSSRS 720 CTKVQKQGSA LGRSVDLAKF NNYDELISEL DDLFEFGGEL KARNKNWLVV YTDDEDDMML 780 VGDDPWGEFC CMVRKLLILT KEEMLRMNPG SLNSKGEDTS SFADGVDANV QSFPSLSPDD 840 Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62000.3 | 0.0 | ARF family protein |