PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TEY12951.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 148aa MW: 16878.3 Da PI: 9.7042 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 58.7 | 7.3e-19 | 11 | 57 | 3 | 49 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49 ien + rq t++k ++gi+KKA EL vLC+++va+i+f+++g+ + TEY12951.1 11 IENPTSRQLTYTKHKEGIIKKAGELAVLCGTDVALIMFAPSGRPASF 57 9****************************************986666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MGRKKLTMRL IENPTSRQLT YTKHKEGIIK KAGELAVLCG TDVALIMFAP SGRPASFASN 60 GRIEDILLRF VDRPDELRGG PINHEEELEE KLDKLTRKQR ESQEKMRYYE PNVEKTNSAL 120 EAGVYQQFLT NPDIKGQTAR QSTLSRKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77950.2 | 1e-24 | MIKC_MADS family protein |