PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY12662.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

GRF

Protein Properties

Length: 385aa MW: 42376.7 Da PI: 8.3756

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY12662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	42.5	1.1e-13	159	184	1	26
WRC 1 daepgrCrRtDGKkWRCsrrvlegkk 26 d+epgrCrRtDGKkWRCsr+++ ++k TEY12662.1 159 DPEPGRCRRTDGKKWRCSRDAVVDQK 184 79********************9998 PP
2	QLQ	61.2	2.8e-21	95	131	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+P++Ll +i+k TEY12662.1 95 GPFTPSQWMELEHQALIYKYITANVPIPSYLLNPIRK 131 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MATPTSPNTA TDGFLKQDRA INEDDLREFK MSKNSSCGEG SLQRSNGCGL SSAEMLSFSS 60 PNPQPLTLPY YHYSSNAFAR NAGMNGGSMQ HGVRGPFTPS QWMELEHQAL IYKYITANVP 120 IPSYLLNPIR KAFEVVGFSS LRSNPLGWNG FHLGYSSTDP EPGRCRRTDG KKWRCSRDAV 180 VDQKSIVENT TSLSKTKPKD SQHQDWEGNE FGLVCSDSLV NPLNRSELRQ FMDQPDRDVD 240 RTQLSISMAS SPPRSGLSRE LEMGLGLGNR PSSNNWAPIS WEPSAIGGPL GEVLHNTTTT 300 PLAMRETAQP HREMGQPPAG RVSHGSLAEG SLRVPLQQQR GGQPAARRLS LSITALRTRI 360 AHTINSLVIV LDICWLEGSM LVLWL

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MATPTSPNTA TDGFLKQDRA INEDDLREFK MSKNSSCGEG SLQRSNGCGL SSAEMLSFSS  60
PNPQPLTLPY YHYSSNAFAR NAGMNGGSMQ HGVRGPFTPS QWMELEHQAL IYKYITANVP  120
IPSYLLNPIR KAFEVVGFSS LRSNPLGWNG FHLGYSSTDP EPGRCRRTDG KKWRCSRDAV  180
VDQKSIVENT TSLSKTKPKD SQHQDWEGNE FGLVCSDSLV NPLNRSELRQ FMDQPDRDVD  240
RTQLSISMAS SPPRSGLSRE LEMGLGLGNR PSSNNWAPIS WEPSAIGGPL GEVLHNTTTT  300
PLAMRETAQP HREMGQPPAG RVSHGSLAEG SLRVPLQQQR GGQPAARRLS LSITALRTRI  360
AHTINSLVIV LDICWLEGSM LVLWL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	4e-37	GRF family protein